RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MMRN1Q13201 1228 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 SEMA3BQ13214 749 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 DPYSL3Q14195 570 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 TUBB8Q3ZCM7 444 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 RABGAP1LQ5R372 815 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 MFSD7Q6UXD7 560 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 FAM217AQ8IXS0 508 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 CPXM2Q8N436 756 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 KIAA1958Q8N8K9 716 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 AENQ8WTP8 325 aaKnown RBP14.88□□□□□ -0.03
LINC00339-208ENST00000634934 DDI1Q8WTU0 396 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 BHMTQ93088 406 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 IGSF8Q969P0 613 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 OTUB2Q96DC9 234 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 TBC1D31Q96DN5 1066 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 TMA16Q96EY4 203 aaKnown RBP14.88□□□□□ -0.03
LINC00339-208ENST00000634934 MYEOVQ96EZ4 313 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 ASIC4Q96FT7 647 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 TRMT61BQ9BVS5 477 aaKnown RBP14.88□□□□□ -0.03
LINC00339-208ENST00000634934 MPP6Q9NZW5 540 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 STIM2Q9P246 746 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 NCOR1O75376 2440 aa14.88□□□□□ -0.03
LINC00339-208ENST00000634934 TYW5A2RUC4 315 aaKnown RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 C3orf70A6NLC5 250 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ASGR2P07307 311 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ARSAP15289 507 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 CETN2P41208 172 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 HNRNPH2P55795 449 aaKnown RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 RPS24P62847 133 aaKnown RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 NRG1Q02297 640 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 FCHO2Q0JRZ9 810 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 PDGFRLQ15198 375 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 EML3Q32P44 896 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 DCAF12L1Q5VU92 463 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 AADACL2Q6P093 401 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 SPOCD1Q6ZMY3 1216 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 RFX8Q6ZV50 586 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 CIR1Q86X95 450 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ADGRG2Q8IZP9 1017 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 PRICKLE1Q96MT3 831 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 CSPG4P5Q96PW8 444 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ZNF670Q9BS34 389 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 MAK16Q9BXY0 300 aaKnown RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 EBF3Q9H4W6 596 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 KCNK12Q9HB15 430 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 SPHK2Q9NRA0 654 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 HPCAL4Q9UM19 191 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 CUL9Q8IWT3 2517 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 TBL1XO60907 577 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 NFATC1O95644 943 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 CYBBP04839 570 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 IL4RP24394 825 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 IRAK1P51617 712 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 SGSHP51688 502 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ZNF135P52742 658 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 TNK2Q07912 1038 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ZSCAN26Q16670 478 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ANO4Q32M45 955 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 MPPE1Q53F39 396 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ANKRD20A8PQ5CZ79 823 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 LY6G5CQ5SRR4 150 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 SEL1L2Q5TEA6 688 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 MANEALQ5VSG8 457 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 KAZNQ674X7 775 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 EMBQ6PCB8 327 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ANKS1BQ7Z6G8 1248 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 TMEM25Q86YD3 366 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 RFX6Q8HWS3 928 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 RNF135Q8IUD6 432 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ZNF683Q8IZ20 524 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 HJURPQ8NCD3 748 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 IRF7Q92985 503 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ATP2A3Q93084 1043 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 FAM83CQ9BQN1 747 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 HEMGNQ9BXL5 484 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 ZYG11BQ9C0D3 744 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 CARD9Q9H257 536 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 BRD9Q9H8M2 597 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 PLK2Q9NYY3 685 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 IGSF9Q9P2J2 1179 aa14.87□□□□□ -0.03
LINC00339-208ENST00000634934 RCOR3Q9P2K3 495 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-208ENST00000634934 IGLV3-10A0A075B6K4 115 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 DRGXA6NNA5 263 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 NEDD8-MDP1E9PL57 170 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 CHADO15335 359 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 CEP104O60308 925 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 CNTN5O94779 1100 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 KRT10P13645 584 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 AMPD1P23109 780 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 HTR7P34969 479 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 CDKN2BP42772 138 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 HCAR3P49019 387 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 COPS2P61201 443 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 DHCR24Q15392 516 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 ALFQ53S48 1182 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 TFDP3Q5H9I0 405 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 RHBDF2Q6PJF5 856 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 TFAP2DQ7Z6R9 452 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 TTC8Q8TAM2 541 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms