RNA–Protein interactions for RNA: ENST00000631023.2

CLN3-240, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-240ENST00000631023 ASLP04424 464 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 DLDP09622 509 aaKnown RBP21.34■■□□□ 1.01
CLN3-240ENST00000631023 PSMA2P25787 234 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 ZNF75DP51815 510 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 MAPK8IP2Q13387 824 aaPredicted RBP21.34■■□□□ 1.01
CLN3-240ENST00000631023 STARD3Q14849 445 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 RAB6CQ53S08 254 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 ANO7Q6IWH7 933 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 SCYL2Q6P3W7 929 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 SERPINA13PQ6UXR4 307 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 SLFN11Q7Z7L1 901 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 RASSF3Q86WH2 238 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 CIR1Q86X95 450 aaPredicted RBP21.34■■□□□ 1.01
CLN3-240ENST00000631023 FNIP1Q8TF40 1166 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 NTAN1Q96AB6 310 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 TTC17Q96AE7 1141 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 RAB6CQ9H0N0 254 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 OSBPL2Q9H1P3 480 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 BCCIPQ9P287 314 aaKnown RBP eCLIP21.34■■□□□ 1.01
CLN3-240ENST00000631023 OR12D3Q9UGF7 316 aa21.34■■□□□ 1.01
CLN3-240ENST00000631023 FAM186AA6NE01 2351 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 ZFHX2Q9C0A1 2572 aaPredicted RBP21.33■■□□□ 1.01
CLN3-240ENST00000631023 TCRBV21S2A2A0A5A6 115 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 DRGXA6NNA5 263 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 RNF8O76064 485 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 HOXC13P31276 330 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 ENPP2Q13822 863 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 SLC18A3Q16572 532 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 FUT11Q495W5 492 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 PITRM1Q5JRX3 1037 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 ZNF683Q8IZ20 524 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 NCAPGQ9BPX3 1015 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 SNX10Q9Y5X0 201 aa21.33■■□□□ 1.01
CLN3-240ENST00000631023 ABCA7Q8IZY2 2146 aa21.33■■□□□ 1
CLN3-240ENST00000631023 PTPRZ1P23471 2315 aaPredicted RBP21.33■■□□□ 1
CLN3-240ENST00000631023 IGLV3-10A0A075B6K4 115 aa21.32■■□□□ 1
CLN3-240ENST00000631023 A0A1W2PQF6 199 aa21.32■■□□□ 1
CLN3-240ENST00000631023 WASH3PC4AMC7 463 aa21.32■■□□□ 1
CLN3-240ENST00000631023 AKR1B10O60218 316 aa21.32■■□□□ 1
CLN3-240ENST00000631023 SYNCRIPO60506 623 aaKnown RBP21.32■■□□□ 1
CLN3-240ENST00000631023 LMNAP02545 664 aaKnown RBP21.32■■□□□ 1
CLN3-240ENST00000631023 IL12RB1P42701 662 aa21.32■■□□□ 1
CLN3-240ENST00000631023 AIF1P55008 147 aa21.32■■□□□ 1
CLN3-240ENST00000631023 ST8SIA6P61647 398 aa21.32■■□□□ 1
CLN3-240ENST00000631023 OGDHQ02218 1023 aa21.32■■□□□ 1
CLN3-240ENST00000631023 NRG1Q02297 640 aaPredicted RBP21.32■■□□□ 1
CLN3-240ENST00000631023 FNDC3BQ53EP0 1204 aaKnown RBP21.32■■□□□ 1
CLN3-240ENST00000631023 PGBD3Q8N328 593 aa21.32■■□□□ 1
CLN3-240ENST00000631023 CYB5D2Q8WUJ1 264 aa21.32■■□□□ 1
CLN3-240ENST00000631023 HMGB4Q8WW32 186 aa21.32■■□□□ 1
CLN3-240ENST00000631023 CCDC42Q96M95 316 aa21.32■■□□□ 1
CLN3-240ENST00000631023 PPARGC1AQ9UBK2 798 aaKnown RBP21.32■■□□□ 1
CLN3-240ENST00000631023 TBC1D30Q9Y2I9 924 aa21.32■■□□□ 1
CLN3-240ENST00000631023 THADAQ6YHU6 1953 aa21.32■■□□□ 1
CLN3-240ENST00000631023 HRO43593 1189 aa21.31■■□□□ 1
CLN3-240ENST00000631023 CSKP41240 450 aa21.31■■□□□ 1
CLN3-240ENST00000631023 PLK1P53350 603 aa21.31■■□□□ 1
CLN3-240ENST00000631023 GFPT1Q06210 699 aaPredicted RBP21.31■■□□□ 1
CLN3-240ENST00000631023 SULT2A1Q06520 285 aa21.31■■□□□ 1
CLN3-240ENST00000631023 SCAPQ12770 1279 aa21.31■■□□□ 1
CLN3-240ENST00000631023 PLEKHG6Q3KR16 790 aa21.31■■□□□ 1
CLN3-240ENST00000631023 USP39Q53GS9 565 aaKnown RBP21.31■■□□□ 1
CLN3-240ENST00000631023 EFHC2Q5JST6 749 aa21.31■■□□□ 1
CLN3-240ENST00000631023 CXorf57Q6NSI4 855 aaKnown RBP21.31■■□□□ 1
CLN3-240ENST00000631023 CCDC185Q8N715 623 aa21.31■■□□□ 1
CLN3-240ENST00000631023 MDGA1Q8NFP4 955 aa21.31■■□□□ 1
CLN3-240ENST00000631023 GAB3Q8WWW8 586 aa21.31■■□□□ 1
CLN3-240ENST00000631023 ZYG11BQ9C0D3 744 aa21.31■■□□□ 1
CLN3-240ENST00000631023 THAP2Q9H0W7 228 aa21.31■■□□□ 1
CLN3-240ENST00000631023 EPC1Q9H2F5 836 aa21.31■■□□□ 1
CLN3-240ENST00000631023 INTS6Q9UL03 887 aaKnown RBP21.31■■□□□ 1
CLN3-240ENST00000631023 RAB23Q9ULC3 237 aa21.31■■□□□ 1
CLN3-240ENST00000631023 PLXND1Q9Y4D7 1925 aa21.31■■□□□ 1
CLN3-240ENST00000631023 NUP205Q92621 2012 aa21.31■■□□□ 1
CLN3-240ENST00000631023 CEP192Q8TEP8 1941 aa21.31■■□□□ 1
CLN3-240ENST00000631023 RPP40O75818 363 aaKnown RBP21.31■■□□□ 1
CLN3-240ENST00000631023 CNTN5O94779 1100 aa21.31■■□□□ 1
CLN3-240ENST00000631023 IRAK1P51617 712 aa21.31■■□□□ 1
CLN3-240ENST00000631023 GALCP54803 685 aa21.31■■□□□ 1
CLN3-240ENST00000631023 SIM2Q14190 667 aaPredicted RBP21.31■■□□□ 1
CLN3-240ENST00000631023 ACAP1Q15027 740 aa21.31■■□□□ 1
CLN3-240ENST00000631023 ALFQ53S48 1182 aa21.31■■□□□ 1
CLN3-240ENST00000631023 CEP68Q76N32 757 aa21.31■■□□□ 1
CLN3-240ENST00000631023 SETD3Q86TU7 594 aaPredicted RBP21.31■■□□□ 1
CLN3-240ENST00000631023 RETREG1Q9H6L5 497 aa21.31■■□□□ 1
CLN3-240ENST00000631023 NHEJ1Q9H9Q4 299 aaPredicted RBP21.31■■□□□ 1
CLN3-240ENST00000631023 MPP6Q9NZW5 540 aa21.31■■□□□ 1
CLN3-240ENST00000631023 RAD54BQ9Y620 910 aa21.31■■□□□ 1
CLN3-240ENST00000631023 MYO15AQ9UKN7 3530 aa21.3■■□□□ 1
CLN3-240ENST00000631023 CHD5Q8TDI0 1954 aa21.3■■□□□ 1
CLN3-240ENST00000631023 EPHX1P07099 455 aa21.3■■□□□ 1
CLN3-240ENST00000631023 RHOCP08134 193 aa21.3■■□□□ 1
CLN3-240ENST00000631023 ECT2LQ008S8 904 aa21.3■■□□□ 1
CLN3-240ENST00000631023 PTPRNQ16849 979 aa21.3■■□□□ 1
CLN3-240ENST00000631023 ASTE1Q2TB18 679 aaPredicted RBP21.3■■□□□ 1
CLN3-240ENST00000631023 C6orf118Q5T5N4 469 aa21.3■■□□□ 1
CLN3-240ENST00000631023 RNF219Q5W0B1 726 aaPredicted RBP21.3■■□□□ 1
CLN3-240ENST00000631023 KIAA1211LQ6NV74 962 aa21.3■■□□□ 1
CLN3-240ENST00000631023 APCDD1Q8J025 514 aa21.3■■□□□ 1
CLN3-240ENST00000631023 CHP1Q99653 195 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms