RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 DDX6P26196 483 aaKnown RBP eCLIP7.75□□□□□ -1.178e-6■□□□□ 8.7
PTP4A1-206ENST00000627002 GABRR2P28476 465 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 FDFT1P37268 417 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 GGCXP38435 758 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 GARSP41250 739 aaKnown RBP7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 GDF10P55107 478 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 DHX9Q08211 1270 aaKnown RBP7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 PPIDQ08752 370 aaKnown RBP7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 AP1B1Q10567 949 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 RABGAP1LQ5R372 815 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 CFAP58Q5T655 872 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 RNASEH2BQ5TBB1 312 aaKnown RBP7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 ALS2CLQ60I27 953 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 RAP1GAP2Q684P5 730 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 RHBDF2Q6PJF5 856 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 PPP1R21Q6ZMI0 780 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 C14orf80Q86SX3 495 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 TMEM150AQ86TG1 271 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 CHSY1Q86X52 802 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 TMC8Q8IU68 726 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 PPIL6Q8IXY8 311 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 ZNF683Q8IZ20 524 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 ZCCHC9Q8N567 271 aaKnown RBP7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 RTL3Q8N8U3 475 aaKnown RBP7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 GLIS1Q8NBF1 620 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 CCNYQ8ND76 341 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 SLC22A17Q8WUG5 538 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 HDAC11Q96DB2 347 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 PKNOX2Q96KN3 472 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 SPATA13Q96N96 652 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 VAT1Q99536 393 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 PRMT1Q99873 361 aaKnown RBP7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 FRMD8Q9BZ67 464 aaPredicted RBP7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 PHACTR1Q9C0D0 580 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 KLC2Q9H0B6 622 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 PRDM12Q9H4Q4 367 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 C10orf88Q9H8K7 445 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 TRPC7Q9HCX4 862 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 MAN1C1Q9NR34 630 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 TMEM248Q9NWD8 314 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 ZDHHC7Q9NXF8 308 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 XPO7Q9UIA9 1087 aaKnown RBP7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 HPCAL4Q9UM19 191 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 YBX2Q9Y2T7 364 aaKnown RBP7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 MFHAS1Q9Y4C4 1052 aa7.75□□□□□ -1.17
PTP4A1-206ENST00000627002 KIAA1671Q9BY89 1806 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 TRAV19A0A0A6YYK7 116 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 GOLGA6BA6NDN3 693 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 ARHGAP42A6NI28 874 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 CHADO15335 359 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 TP73O15350 636 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 OPHN1O60890 802 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 CSPG5O95196 566 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 PTPN2P17706 415 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 HDCP19113 662 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 CCNCP24863 283 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 CORO1AP31146 461 aaKnown RBP7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 IRS1P35568 1242 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 MAPKAPK2P49137 400 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 KCNQ1P51787 676 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 NDST2P52849 883 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 PMS2P54278 862 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 EPHA5P54756 1037 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 BASP1P80723 227 aaKnown RBP7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 SLC7A9P82251 487 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 CAMK1Q14012 370 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 C5orf22Q49AR2 442 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 ARHGAP15Q53QZ3 475 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 ARTNQ5T4W7 220 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 TTC39BQ5VTQ0 682 aaPredicted RBP7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 AFMIDQ63HM1 303 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 PPP2R2DQ66LE6 453 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 NADSYN1Q6IA69 706 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 TIGD7Q6NT04 549 aaPredicted RBP7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 FBXL22Q6P050 247 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 ARHGEF18Q6ZSZ5 1173 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 GAREM2Q75VX8 874 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 B4GALNT4Q76KP1 1039 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 TRMT10CQ7L0Y3 403 aaKnown RBP7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 PRUNE1Q86TP1 453 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 NLRP14Q86W24 1093 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 RELL1Q8IUW5 271 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 DENND1CQ8IV53 801 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 SPNS2Q8IVW8 549 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 CCDC13Q8IYE1 715 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 LGI2Q8N0V4 545 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 UMODL1-AS1Q8N2C9 162 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 ATPAF2Q8N5M1 289 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 NPWQ8N729 165 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 ARL14EPQ8N8R7 260 aaPredicted RBP7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 CPT1BQ92523 772 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 P2RY11Q96G91 374 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 FAM161BQ96MY7 647 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 GDAP1L1Q96MZ0 367 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 RPRD1AQ96P16 312 aaPredicted RBP7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 TSGA13Q96PP4 275 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 RUFY1Q96T51 708 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 LGMNQ99538 433 aa7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 CDCA3Q99618 268 aaPredicted RBP7.74□□□□□ -1.17
PTP4A1-206ENST00000627002 CORO1BQ9BR76 489 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms