RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ADAM22Q9P0K1 906 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 INTS6Q9UL03 887 aaKnown RBP23.06■■□□□ 1.28
SF1-220ENST00000626028 HS3ST4Q9Y661 456 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.06■■□□□ 1.28
SF1-220ENST00000626028 CACNA1EQ15878 2313 aa23.06■■□□□ 1.28
SF1-220ENST00000626028 CHD5Q8TDI0 1954 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 SERPINC1P01008 464 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 DHPSP49366 369 aaPredicted RBP23.05■■□□□ 1.28
SF1-220ENST00000626028 COPAP53621 1224 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 RPL6Q02878 288 aaKnown RBP23.05■■□□□ 1.28
SF1-220ENST00000626028 C1QBPQ07021 282 aaKnown RBP23.05■■□□□ 1.28
SF1-220ENST00000626028 PTP4A2Q12974 167 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 PLEKHG6Q3KR16 790 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 FIGNQ5HY92 759 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 PEAR1Q5VY43 1037 aaPredicted RBP23.05■■□□□ 1.28
SF1-220ENST00000626028 LYSMD4Q5XG99 296 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 KIAA1324Q6UXG2 1013 aaKnown RBP23.05■■□□□ 1.28
SF1-220ENST00000626028 SLC30A5Q8TAD4 765 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 BAP1Q92560 729 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 FOXJ1Q92949 421 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 ADAM33Q9BZ11 813 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 ITIH6Q6UXX5 1313 aa23.05■■□□□ 1.28
SF1-220ENST00000626028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.04■■□□□ 1.28
SF1-220ENST00000626028 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 ACADMP11310 421 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 CD6P30203 668 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 PTPN9P43378 593 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 CDH4P55283 916 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 ECT2LQ008S8 904 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 ZNF177Q13360 481 aaPredicted RBP23.04■■□□□ 1.28
SF1-220ENST00000626028 NR1I3Q14994 352 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 C2CD6Q53TS8 623 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 LRRC31Q6UY01 552 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 IRF2BP2Q7Z5L9 587 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 TMEFF1Q8IYR6 380 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 C3orf20Q8ND61 904 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 PCDHB18PQ96TA0 734 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 C11orf70Q9BRQ4 267 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 PCED1AQ9H1Q7 454 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 RETREG1Q9H6L5 497 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 CBX8Q9HC52 389 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 METTL5Q9NRN9 209 aaKnown RBP23.04■■□□□ 1.28
SF1-220ENST00000626028 AIPL1Q9NZN9 384 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 EVLQ9UI08 416 aaPredicted RBP23.04■■□□□ 1.28
SF1-220ENST00000626028 VANGL2Q9ULK5 521 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 SCML1Q9UN30 329 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 TBC1D30Q9Y2I9 924 aa23.04■■□□□ 1.28
SF1-220ENST00000626028 TARSL2A2RTX5 802 aaKnown RBP23.03■■□□□ 1.28
SF1-220ENST00000626028 NDUFS2O75306 463 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 ADCY5O95622 1261 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 KRT3P12035 628 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 TFE3P19532 575 aaPredicted RBP23.03■■□□□ 1.28
SF1-220ENST00000626028 SDC4P31431 198 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 NNMTP40261 264 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 HNRNPA1L2Q32P51 320 aaKnown RBP23.03■■□□□ 1.28
SF1-220ENST00000626028 AASDHQ4L235 1098 aaPredicted RBP23.03■■□□□ 1.28
SF1-220ENST00000626028 CXorf57Q6NSI4 855 aaKnown RBP23.03■■□□□ 1.28
SF1-220ENST00000626028 TRNP1Q6NT89 227 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 MON1BQ7L1V2 547 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 STRADAQ7RTN6 431 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 FRMD1Q8N878 549 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 CADM4Q8NFZ8 388 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 IGSF8Q969P0 613 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 IQCDQ96DY2 449 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 MYO19Q96H55 970 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 ZNF419Q96HQ0 510 aaPredicted RBP23.03■■□□□ 1.28
SF1-220ENST00000626028 VCPIP1Q96JH7 1222 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 CFAP57Q96MR6 1250 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 NUP58Q9BVL2 599 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 PRSS16Q9NQE7 514 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 CYP8B1Q9UNU6 501 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 ERVW-1Q9UQF0 538 aa23.03■■□□□ 1.28
SF1-220ENST00000626028 IGLV3-10A0A075B6K4 115 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.02■■□□□ 1.28
SF1-220ENST00000626028 C2CD4BA6NLJ0 364 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 SLC30A4O14863 429 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 KHNYNO15037 678 aaKnown RBP23.02■■□□□ 1.28
SF1-220ENST00000626028 PDGFRAP16234 1089 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 PTGER3P43115 390 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 TPMTP51580 245 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 SFSWAPQ12872 951 aaKnown RBP23.02■■□□□ 1.28
SF1-220ENST00000626028 SF3A2Q15428 464 aaKnown RBP23.02■■□□□ 1.28
SF1-220ENST00000626028 ARL13BQ3SXY8 428 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 RNF219Q5W0B1 726 aaPredicted RBP23.02■■□□□ 1.28
SF1-220ENST00000626028 SETD3Q86TU7 594 aaPredicted RBP23.02■■□□□ 1.28
SF1-220ENST00000626028 ZNF683Q8IZ20 524 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 CEP76Q8TAP6 659 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 MRGPRX3Q96LB0 322 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 NAP1L5Q96NT1 182 aaPredicted RBP23.02■■□□□ 1.28
SF1-220ENST00000626028 SYT11Q9BT88 431 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 SIK2Q9H0K1 926 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 WSB2Q9NYS7 404 aaPredicted RBP23.02■■□□□ 1.28
SF1-220ENST00000626028 PILRBQ9UKJ0 227 aa23.02■■□□□ 1.28
SF1-220ENST00000626028 DNAH14Q0VDD8 3507 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 SIGLEC16A6NMB1 481 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 DRGXA6NNA5 263 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 GOLGA6L19H0YKK7 550 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 HLA-EP13747 358 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 NRG1Q02297 640 aaPredicted RBP23.01■■□□□ 1.27
SF1-220ENST00000626028 ZNF33AQ06730 810 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms