RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 TBC1D3CQ6IPX1 549 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 ZNF474Q6S9Z5 364 aaPredicted RBP3.75□□□□□ -1.81
VBP1-204ENST00000625964 KLHL17Q6TDP4 642 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 TBC1D3Q8IZP1 549 aaPredicted RBP3.75□□□□□ -1.81
VBP1-204ENST00000625964 OR1N1Q8NGS0 311 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 BCAS4Q8TDM0 211 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 SLC39A13Q96H72 371 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 RMDN3Q96TC7 470 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 TUBB6Q9BUF5 446 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 TMEM120AQ9BXJ8 343 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 BRD8Q9H0E9 1235 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 PAPOLBQ9NRJ5 636 aaKnown RBP3.75□□□□□ -1.81
VBP1-204ENST00000625964 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.75□□□□□ -1.81
VBP1-204ENST00000625964 DACT1Q9NYF0 836 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 HEY2Q9UBP5 337 aa3.75□□□□□ -1.81
VBP1-204ENST00000625964 C3orf70A6NLC5 250 aaPredicted RBP3.74□□□□□ -1.81
VBP1-204ENST00000625964 SLC38A8A6NNN8 435 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 C4orf47A7E2U8 309 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 ACTL6BO94805 426 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 LARGE1O95461 756 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 ALDOCP09972 364 aaKnown RBP3.74□□□□□ -1.81
VBP1-204ENST00000625964 TGM2P21980 687 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 FOXL2P58012 376 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 RBM6P78332 1123 aaKnown RBP3.74□□□□□ -1.81
VBP1-204ENST00000625964 SHC2P98077 582 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 OS9Q13438 667 aaPredicted RBP3.74□□□□□ -1.81
VBP1-204ENST00000625964 MTX1Q13505 466 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 BLMHQ13867 455 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 MORC3Q14149 939 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 LIN54Q6MZP7 749 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 LRIG3Q6UXM1 1119 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 ADGRF3Q8IZF5 1079 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 ARL14EPQ8N8R7 260 aaPredicted RBP3.74□□□□□ -1.81
VBP1-204ENST00000625964 FAM47BQ8NA70 645 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 WIPF2Q8TF74 440 aaPredicted RBP3.74□□□□□ -1.81
VBP1-204ENST00000625964 RSC1A1Q92681 617 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 EID2BQ96D98 161 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 LTV1Q96GA3 475 aaPredicted RBP3.74□□□□□ -1.81
VBP1-204ENST00000625964 ZNF347Q96SE7 839 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 HTATIP2Q9BUP3 242 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 OSBPL5Q9H0X9 879 aaPredicted RBP3.74□□□□□ -1.81
VBP1-204ENST00000625964 SFXN1Q9H9B4 322 aa3.74□□□□□ -1.81
VBP1-204ENST00000625964 HERC5Q9UII4 1024 aaKnown RBP3.74□□□□□ -1.81
VBP1-204ENST00000625964 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.74□□□□□ -1.81
VBP1-204ENST00000625964 FAM90A18PA6NE21 464 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 FAM90A16PA6NEW6 464 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 FAM90A9PA6NNJ1 464 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 FAM90A5PA8MXJ8 464 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 SGPL1O95470 568 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 CSTBP04080 98 aaKnown RBP3.73□□□□□ -1.81
VBP1-204ENST00000625964 CYP3A4P08684 503 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 FAM90A15PP0C7V4 464 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 FAM90A14PP0C7W9 464 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 SERPINF1P36955 418 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 ME1P48163 572 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 AP2B1P63010 937 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 PGM5Q15124 567 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 RPS6KA2Q15349 733 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 TRIM60Q495X7 471 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 CCDC38Q502W7 563 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 SULT6B1Q6IMI4 303 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 NFRKBQ6P4R8 1299 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 RAB11FIP2Q7L804 512 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 PIP4P1Q86T03 277 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 CCDC117Q8IWD4 279 aaPredicted RBP3.73□□□□□ -1.81
VBP1-204ENST00000625964 ARFGAP1Q8N6T3 406 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 ZNF548Q8NEK5 533 aaPredicted RBP3.73□□□□□ -1.81
VBP1-204ENST00000625964 OR52N4Q8NGI2 321 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 CLEC4CQ8WTT0 213 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 ZFYVE19Q96K21 471 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 PIMREGQ9BSJ6 248 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 SORBS1Q9BX66 1292 aaKnown RBP3.73□□□□□ -1.81
VBP1-204ENST00000625964 ELAC1Q9H777 363 aaKnown RBP3.73□□□□□ -1.81
VBP1-204ENST00000625964 AAMDCQ9H7C9 122 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 SEPSECSQ9HD40 501 aaKnown RBP3.73□□□□□ -1.81
VBP1-204ENST00000625964 LIN7CQ9NUP9 197 aaKnown RBP3.73□□□□□ -1.81
VBP1-204ENST00000625964 UTS2RQ9UKP6 389 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 DAPP1Q9UN19 280 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 HS3ST3B1Q9Y662 390 aa3.73□□□□□ -1.81
VBP1-204ENST00000625964 TTBK1Q5TCY1 1321 aaPredicted RBP3.72□□□□□ -1.81
VBP1-204ENST00000625964 DPPA5A6NC42 116 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 AGAP5A6NIR3 686 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 MBD3L5A6NJ08 208 aaPredicted RBP3.72□□□□□ -1.81
VBP1-204ENST00000625964 EFCAB8A8MWE9 144 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 GAS8-AS1O95177 125 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 NFATC1O95644 943 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 PSG1P11464 419 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 IGFBP2P18065 325 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 CIITAP33076 1130 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 POLE2P56282 527 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 B4GALNT1Q00973 533 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 C9orf50Q5SZB4 431 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 TMEM88Q6PEY1 159 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 SLC44A2Q8IWA5 706 aaPredicted RBP3.72□□□□□ -1.81
VBP1-204ENST00000625964 SCAMP5Q8TAC9 235 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 C3orf49Q96BT1 292 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 PRDM8Q9NQV8 689 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 MSRB1Q9NZV6 116 aa3.72□□□□□ -1.81
VBP1-204ENST00000625964 AGO2Q9UKV8 859 aaKnown RBP3.72□□□□□ -1.81
VBP1-204ENST00000625964 COPG1Q9Y678 874 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms