RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 HNRNPA1L2Q32P51 320 aaKnown RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 FNDC3BQ53EP0 1204 aaKnown RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 PITRM1Q5JRX3 1037 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 CYP2U1Q7Z449 544 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 TMPRSS6Q8IU80 811 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 SYT12Q8IV01 421 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 CCAR2Q8N163 923 aaKnown RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 CARNMT1Q8N4J0 409 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 C3orf20Q8ND61 904 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 CADM4Q8NFZ8 388 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 CEP76Q8TAP6 659 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 RLN3Q8WXF3 142 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 PRCCQ92733 491 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 MYEOVQ96EZ4 313 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 SIPA1Q96FS4 1042 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 ZNF419Q96HQ0 510 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 VCPIP1Q96JH7 1222 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 AIPL1Q9NZN9 384 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 CDV3Q9UKY7 258 aaKnown RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 INTS6Q9UL03 887 aaKnown RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 TBC1D30Q9Y2I9 924 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 IGLV3-10A0A075B6K4 115 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 SYCE3A1L190 88 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 TARSL2A2RTX5 802 aaKnown RBP12.83□□□□□ -0.36
LINC00963-217ENST00000624009 CD6P30203 668 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 RDXP35241 583 aaKnown RBP12.83□□□□□ -0.36
LINC00963-217ENST00000624009 SULT1E1P49888 294 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 ECT2LQ008S8 904 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 RPL6Q02878 288 aaKnown RBP12.83□□□□□ -0.36
LINC00963-217ENST00000624009 PTP4A2Q12974 167 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 NR1I3Q14994 352 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 RSPO4Q2I0M5 234 aaPredicted RBP12.83□□□□□ -0.36
LINC00963-217ENST00000624009 LYSMD4Q5XG99 296 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 MMS22LQ6ZRQ5 1243 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 STRADAQ7RTN6 431 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 IRF2BP2Q7Z5L9 587 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 SETD3Q86TU7 594 aaPredicted RBP12.83□□□□□ -0.36
LINC00963-217ENST00000624009 C12orf50Q8NA57 414 aaPredicted RBP12.83□□□□□ -0.36
LINC00963-217ENST00000624009 SORCS1Q8WY21 1168 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 BAP1Q92560 729 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 CENPIQ92674 756 aaPredicted RBP12.83□□□□□ -0.36
LINC00963-217ENST00000624009 MYO19Q96H55 970 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 RPRD1AQ96P16 312 aaPredicted RBP12.83□□□□□ -0.36
LINC00963-217ENST00000624009 TBCBQ99426 244 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 AGPAT1Q99943 283 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 SYT11Q9BT88 431 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 ADAM33Q9BZ11 813 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 TKTL2Q9H0I9 626 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 WSB2Q9NYS7 404 aaPredicted RBP12.83□□□□□ -0.36
LINC00963-217ENST00000624009 ADAM22Q9P0K1 906 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 STIM2Q9P246 746 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 RAD54BQ9Y620 910 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 HS3ST4Q9Y661 456 aa12.83□□□□□ -0.36
LINC00963-217ENST00000624009 SYNJ2BP-COX16A0A087WUM0 186 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.82□□□□□ -0.36
LINC00963-217ENST00000624009 C2CD4BA6NLJ0 364 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 SIGLEC16A6NMB1 481 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 DRGXA6NNA5 263 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 TEX33O43247 280 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 ADCY5O95622 1261 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 ACADMP11310 421 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 KRT3P12035 628 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 GZMAP12544 262 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 SDC4P31431 198 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 NNMTP40261 264 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 PRKCIP41743 596 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 DHPSP49366 369 aaPredicted RBP12.82□□□□□ -0.36
LINC00963-217ENST00000624009 TPMTP51580 245 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 RNASE9P60153 205 aaKnown RBP12.82□□□□□ -0.36
LINC00963-217ENST00000624009 ZNF177Q13360 481 aaPredicted RBP12.82□□□□□ -0.36
LINC00963-217ENST00000624009 FSCBQ5H9T9 825 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 CXorf57Q6NSI4 855 aaKnown RBP12.82□□□□□ -0.36
LINC00963-217ENST00000624009 SLC23A3Q6PIS1 610 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 LRRC31Q6UY01 552 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 ZNF783Q6ZMS7 281 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 USP30Q70CQ3 517 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 MON1BQ7L1V2 547 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 ZNF683Q8IZ20 524 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 CFAP52Q8N1V2 620 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 CYB5D2Q8WUJ1 264 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 MRGPRX3Q96LB0 322 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 PCDHB18PQ96TA0 734 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 NUP58Q9BVL2 599 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 TTYH3Q9C0H2 523 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
LINC00963-217ENST00000624009 PRSS16Q9NQE7 514 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 COX16Q9P0S2 106 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 PPARGC1AQ9UBK2 798 aaKnown RBP12.82□□□□□ -0.36
LINC00963-217ENST00000624009 SUSD2Q9UGT4 822 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 PILRBQ9UKJ0 227 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 ERVW-1Q9UQF0 538 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.82□□□□□ -0.36
LINC00963-217ENST00000624009 EPG5Q9HCE0 2579 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 KNTC1P50748 2209 aa12.82□□□□□ -0.36
LINC00963-217ENST00000624009 PCDH15Q96QU1 1955 aa12.81□□□□□ -0.36
LINC00963-217ENST00000624009 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.81□□□□□ -0.36
LINC00963-217ENST00000624009 EDDM13A0A1B0GTR0 161 aa12.81□□□□□ -0.36
LINC00963-217ENST00000624009 A0A1W2PQJ5 194 aa12.81□□□□□ -0.36
LINC00963-217ENST00000624009 TCRBV5S1A1TA0A578 114 aa12.81□□□□□ -0.36
LINC00963-217ENST00000624009 GOLGA8SH3BPF8 625 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms