RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 ZC3H18Q86VM9 953 aaKnown RBP6.42□□□□□ -1.38
CDKL5-205ENST00000623535 SLC4A11Q8NBS3 891 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 OVCA2Q8WZ82 227 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 ANKEF1Q9NU02 776 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 FAM49BQ9NUQ9 324 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 MOCS1Q9NZB8 636 aa6.42□□□□□ -1.38
CDKL5-205ENST00000623535 ALDOAP04075 364 aaKnown RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 APRTP07741 180 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 STAT5AP42229 794 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 KCNJ2P63252 427 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 GALNT13Q8IUC8 556 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 SNX33Q8WV41 574 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 CASTOR2A6NHX0 329 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 WRBO00258 174 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 RRP9O43818 475 aaKnown RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 CDH3P22223 829 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 LCTLQ6UWM7 567 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 TRAPPC11Q7Z392 1133 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 CLIC6Q96NY7 704 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ENY2Q9NPA8 101 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 EPN1Q9Y6I3 576 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ARHGAP31Q2M1Z3 1444 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 CASP9P55211 416 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ITGA1P56199 1179 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 RHBDL3P58872 404 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 GPM6BQ13491 265 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 QRICH1Q2TAL8 776 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ZNF618Q5T7W0 954 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 CASP12Q6UXS9 341 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 RBM43Q6ZSC3 357 aaKnown RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ZNF483Q8TF39 744 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 TMEM68Q96MH6 324 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 TESK2Q96S53 571 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 RAB9BQ9NP90 201 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 RWDD2AQ9UIY3 292 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 FPGTO14772 594 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ABCB7O75027 752 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 HERVK_113P62684 666 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 BMPR2Q13873 1038 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 SYDE1Q6ZW31 735 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 UBXN10Q96LJ8 280 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 NECTIN4Q96NY8 510 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 GLIS2Q9BZE0 524 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 TMEM191CA6NGB0 347 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 IL1AP01583 271 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 RAD23BP54727 409 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 CCL23P55773 120 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 GUCY2DQ02846 1103 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 CBX2Q14781 532 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 CATSPEREQ5SY80 951 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 PCNX4Q63HM2 1172 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ULK2Q8IYT8 1036 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 IZUMO1Q8IYV9 350 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 FERD3LQ96RJ6 166 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 NIF3L1Q9GZT8 377 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ZNF624Q9P2J8 865 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 RNASEH2AO75792 299 aaKnown RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 LCA5LO95447 670 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 IDSP22304 550 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 MRPL41Q8IXM3 137 aaKnown RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 PIGKQ92643 395 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 MOCOSQ96EN8 888 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 TRIM2Q9C040 744 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 SPATC1LQ9H0A9 340 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 HSPBP1Q9NZL4 362 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 HPS5Q9UPZ3 1129 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 MAGED1Q9Y5V3 778 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 SNCAIPQ9Y6H5 919 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 NRCAMQ92823 1304 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 GPR37L1O60883 481 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 TMEM253P0C7T8 217 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 OGNP20774 298 aaKnown RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 RPL4P36578 427 aaKnown RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ERVK-24P63145 666 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 MYBPC2Q14324 1141 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 EBNA1BP2Q99848 306 aaKnown RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ALG2Q9H553 416 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 UBA2Q9UBT2 640 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 CORO2BQ9UQ03 480 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 IQSEC2Q5JU85 1478 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 F8VZ95 297 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 TRIM38O00635 465 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 TBX3O15119 743 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 MFN2O95140 757 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 PGS1Q32NB8 556 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 SLC2A7Q6PXP3 512 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ZNF677Q86XU0 584 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 ZNF527Q8NB42 609 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 TRPV4Q9HBA0 871 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 GRM6O15303 877 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 PFKFB1P16118 471 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 MYL12AP19105 171 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 TYMPP19971 482 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 CLK1P49759 484 aaKnown RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 RRP1BQ14684 758 aaKnown RBP6.41□□□□□ -1.38
CDKL5-205ENST00000623535 FAM187BQ17R55 369 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 AP5B1Q2VPB7 878 aa6.41□□□□□ -1.38
CDKL5-205ENST00000623535 C2CD6Q53TS8 623 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms