RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CFAP99D6REC4 459 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 RHOAP61586 193 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 ZNF410Q86VK4 478 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 B4GALNT2Q8NHY0 566 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 CPXM1Q96SM3 734 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 TEX12Q9BXU0 123 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 ABHD16BQ9H3Z7 469 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 SMPD4Q9NXE4 827 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 INPP4BO15327 924 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 PREPLQ4J6C6 727 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-215ENST00000622697 ELMSAN1Q6PJG2 1045 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 PSTKQ8IV42 348 aaKnown RBP16.47■□□□□ 0.23
GABRB3-215ENST00000622697 PPP2R3CQ969Q6 453 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 ZNF184Q99676 751 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-215ENST00000622697 KCTD14Q9BQ13 255 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-215ENST00000622697 GBA2Q9HCG7 927 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-215ENST00000622697 DDX18Q9NVP1 670 aaKnown RBP16.47■□□□□ 0.23
GABRB3-215ENST00000622697 TEKT2Q9UIF3 430 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 DSEQ9UL01 958 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 PEX1O43933 1283 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 TSPAN8P19075 237 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 NOS2P35228 1153 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 SLC39A12Q504Y0 691 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 TREML2Q5T2D2 321 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 SLC44A2Q8IWA5 706 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-215ENST00000622697 CENPLQ8N0S6 344 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-215ENST00000622697 LRRC39Q96DD0 335 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 SHISA4Q96DD7 197 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 SYTL2Q9HCH5 934 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 SCN3BQ9NY72 215 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 GGA2Q9UJY4 613 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 CROTQ9UKG9 612 aa16.47■□□□□ 0.23
GABRB3-215ENST00000622697 SRRM3A6NNA2 597 aaPredicted RBP16.46■□□□□ 0.23
GABRB3-215ENST00000622697 MRASO14807 208 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 NFKB1P19838 968 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 CYP51A1Q16850 503 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 MYO1HQ8N1T3 1032 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 DDI1Q8WTU0 396 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 CERS2Q96G23 380 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 MRPL45Q9BRJ2 306 aaKnown RBP16.46■□□□□ 0.23
GABRB3-215ENST00000622697 DMAP1Q9NPF5 467 aaPredicted RBP16.46■□□□□ 0.23
GABRB3-215ENST00000622697 PLA2G4CQ9UP65 541 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 ZNF682O95780 498 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 CKMP06732 381 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 SCNN1GP51170 649 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 NRF1Q16656 503 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 HSDL1Q3SXM5 330 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 SLC22A9Q8IVM8 553 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 C12orf56Q8IXR9 622 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 A8MX80 341 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 DNAJB2P25686 324 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 RENBPP51606 427 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 FCGRTP55899 365 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 SLC35G1Q2M3R5 365 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 SIX2Q9NPC8 291 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 ACSS2Q9NR19 701 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 CCNT2O60583 730 aaKnown RBP16.46■□□□□ 0.23
GABRB3-215ENST00000622697 DEAF1O75398 565 aaPredicted RBP16.46■□□□□ 0.23
GABRB3-215ENST00000622697 SERPINF2P08697 491 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 CREB1P16220 341 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 MMP8P22894 467 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 PBLDP30039 288 aaPredicted RBP16.46■□□□□ 0.23
GABRB3-215ENST00000622697 PSEN2P49810 448 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 TRAF2Q12933 501 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 SLC1A5Q15758 541 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 FAM182AQ5T1J6 154 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 ABHD15Q6UXT9 468 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 DNAJC14Q6Y2X3 702 aaPredicted RBP16.46■□□□□ 0.23
GABRB3-215ENST00000622697 DTNBP1Q96EV8 351 aa16.46■□□□□ 0.23
GABRB3-215ENST00000622697 ZMYM2Q9UBW7 1377 aa16.46■□□□□ 0.22
GABRB3-215ENST00000622697 PAPSS1O43252 624 aaPredicted RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 CPSF4O95639 269 aaKnown RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 SLC2A4P14672 509 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 ME2P23368 584 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 PWP1Q13610 501 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 POLD3Q15054 466 aaPredicted RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 TTLL9Q3SXZ7 439 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 NDNQ99608 321 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 WRAP73Q9P2S5 460 aaPredicted RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 FAM50BQ9Y247 325 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 SCAMP3O14828 347 aaKnown RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 FAM58BPP0C7Q3 252 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 CRABP2P29373 138 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 RPL14P50914 215 aaKnown RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 FNBP1LQ5T0N5 605 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 BHLHE22Q8NFJ8 381 aaPredicted RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 GEMIN8Q9NWZ8 242 aaKnown RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 FMO4P31512 558 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 DHFR2Q86XF0 187 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 NT5DC4Q86YG4 428 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 FBXO39Q8N4B4 442 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 EDF1O60869 148 aaKnown RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 C4BPAP04003 597 aaKnown RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 FIG4Q92562 907 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 NDRG1Q92597 394 aaKnown RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 EBNA1BP2Q99848 306 aaKnown RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 SYBUQ9NX95 663 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 APOA1P02647 267 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 CD48P09326 243 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 NPR3P17342 541 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms