RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 GRTP1Q5TC63 336 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 RFWD3Q6PCD5 774 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.67□□□□□ -0.86
PDPN-212ENST00000621990 C2orf69Q8N8R5 385 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 NETO2Q8NC67 525 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 ZSCAN18Q8TBC5 510 aaPredicted RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 IRGQQ8WZA9 623 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 FCRL3Q96P31 734 aaPredicted RBP9.67□□□□□ -0.86
PDPN-212ENST00000621990 KCNK16Q96T55 309 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 CCDC106Q9BWC9 280 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 COLEC11Q9BWP8 271 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 GBA3Q9H227 469 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 LRRC40Q9H9A6 602 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 FAM105AQ9NUU6 356 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 CENPFP49454 3210 aa9.67□□□□□ -0.86
PDPN-212ENST00000621990 SYNJ2BP-COX16A0A087WUM0 186 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 ZCWPW2A0A1B0GU75 182 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 F5H423 210 aaPredicted RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 KCNK1O00180 336 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 USP1O94782 785 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 LTFP02788 710 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 SERPINA6P08185 405 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 ALOX15P16050 662 aaPredicted RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 MX2P20592 715 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 RPL9P32969 192 aaKnown RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 CD68P34810 354 aaPredicted RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 MLH1P40692 756 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 CLCNKBP51801 687 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 RAP1GDS1P52306 607 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 TPI1P60174 286 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 ZNF33AQ06730 810 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 TUBB3Q13509 450 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 PM20D1Q6GTS8 502 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 PID1Q7Z2X4 250 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 RASSF3Q86WH2 238 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 TREML1Q86YW5 311 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 C3orf58Q8NDZ4 430 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 TTC8Q8TAM2 541 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 SMARCD1Q96GM5 515 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 ZNF778Q96MU6 729 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 VAT1Q99536 393 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 PIH1D1Q9NWS0 290 aaKnown RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 COX16Q9P0S2 106 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 SEPT10Q9P0V9 454 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 ZFATQ9P243 1243 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 ARMCX1Q9P291 453 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 RPS6KL1Q9Y6S9 549 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 PTPRDP23468 1912 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 CAPN9O14815 690 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 MAGEC1O60732 1142 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 THP07101 528 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 AOC1P19801 751 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 GRK2P25098 689 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 CSRP3P50461 194 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 AFF1P51825 1210 aaKnown RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 EIF4EBP2Q13542 120 aaPredicted RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 UPP1Q16831 310 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 ARL13BQ3SXY8 428 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 KHDC1Q4VXA5 237 aaKnown RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 DSTYKQ6XUX3 929 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 BEND5Q7L4P6 421 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 MRPL10Q7Z7H8 261 aaKnown RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 TMPRSS6Q8IU80 811 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 TEX9Q8N6V9 391 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 SMC1BQ8NDV3 1235 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 ADAM32Q8TC27 787 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 PIWIL2Q8TC59 973 aaKnown RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 RBBP8Q99708 897 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 RTP3Q9BQQ7 232 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 SENP6Q9GZR1 1112 aaPredicted RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 C1orf21Q9H246 121 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 KLHL8Q9P2G9 620 aaPredicted RBP9.66□□□□□ -0.86
PDPN-212ENST00000621990 VANGL2Q9ULK5 521 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 ST3GAL5Q9UNP4 418 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 GIT1Q9Y2X7 761 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 TRPV2Q9Y5S1 764 aa9.66□□□□□ -0.86
PDPN-212ENST00000621990 MAGEB16A2A368 324 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 ARL5CA6NH57 179 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 CACNG3O60359 315 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 KPNA6O60684 536 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 SERPINE1P05121 402 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 RPSAP08865 295 aaKnown RBP9.65□□□□□ -0.86
PDPN-212ENST00000621990 USP17L7P0C7H9 530 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 ERVK-10P10266 1014 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 NCAM1P13591 858 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 GARSP41250 739 aaKnown RBP9.65□□□□□ -0.86
PDPN-212ENST00000621990 LIMK2P53671 638 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 RABGAP1LQ5R372 815 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 FAM171BQ6P995 826 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDPN-212ENST00000621990 OR52K1Q8NGK4 314 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 GAD1Q99259 594 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 PKMYT1Q99640 499 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 APBA2Q99767 749 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 MLPHQ9BV36 600 aaPredicted RBP9.65□□□□□ -0.86
PDPN-212ENST00000621990 CXorf56Q9H5V9 222 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 DDIT4Q9NX09 232 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 COPG2Q9UBF2 871 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 CACNG4Q9UBN1 327 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 PLA2G4CQ9UP65 541 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms