RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SERPINB5P36952 375 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 NADK2Q4G0N4 442 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 GRTP1Q5TC63 336 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 KLHDC10Q6PID8 442 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 EXOC8Q8IYI6 725 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 HACE1Q8IYU2 909 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 CCDC185Q8N715 623 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 SLC35F5Q8WV83 523 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 AFG1LQ8WV93 481 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 CENPIQ92674 756 aaPredicted RBP20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 LENG1Q96BZ8 264 aaPredicted RBP20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 PGBD4Q96DM1 585 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 CERS2Q96G23 380 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 NAT9Q9BTE0 207 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 ASB7Q9H672 318 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 TCF7L2Q9NQB0 619 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 TXNDC16Q9P2K2 825 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 AP4B1Q9Y6B7 739 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 TMEM114B3SHH9 223 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 THOP1P52888 689 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 MRPS22P82650 360 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 MYBPC1Q00872 1141 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 TMEM132DQ14C87 1099 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 PPM1LQ5SGD2 360 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 RARS2Q5T160 578 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 B3GNT6Q6ZMB0 384 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 SNX32Q86XE0 403 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 TDRD5Q8NAT2 981 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 CLEC4CQ8WTT0 213 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 PGLYRP2Q96PD5 576 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 GPR20Q99678 358 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 MRPS26Q9BYN8 205 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 HOXC10Q9NYD6 342 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 PLK2Q9NYY3 685 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 ADAM28Q9UKQ2 775 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 SCN1AP35498 2009 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 RNF103O00237 685 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 ARIH2O95376 493 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 THRAP10827 490 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 MCF2P10911 925 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 GOT1P17174 413 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 XRCC1P18887 633 aaPredicted RBP20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 SERPINB8P50452 374 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 ZNF280AP59817 542 aaPredicted RBP20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 ZNF423Q2M1K9 1284 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 HSDL1Q3SXM5 330 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 EEPD1Q7L9B9 569 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 TMEM126BQ8IUX1 230 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 DSELQ8IZU8 1212 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 AHI1Q8N157 1196 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 DNAJC1Q96KC8 554 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 CNDP1Q96KN2 507 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 FCRL3Q96P31 734 aaPredicted RBP20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 SERPINI1Q99574 410 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 RBBP8Q99708 897 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 CEP41Q9BYV8 373 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 ZNF696Q9H7X3 374 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 FAM49BQ9NUQ9 324 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 GGA3Q9NZ52 723 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 WDR90Q96KV7 1748 aa20.03■□□□□ 0.8
PDLIM3-212ENST00000620787 MFSD11O43934 449 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 TMCC1O94876 653 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 SETSIPP0DME0 302 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 PSMB4P28070 264 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 GK3PQ14409 553 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 PIGGQ5H8A4 983 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 DCAF15Q66K64 600 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 C16orf89Q6UX73 402 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 CLEC14AQ86T13 490 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 PYROXD2Q8N2H3 581 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 NETO2Q8NC67 525 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 AGR3Q8TD06 166 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 ZFRQ96KR1 1074 aaKnown RBP20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 LRGUKQ96M69 825 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 GOLGA8QA0A0J9YX86 632 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 GOLGA8OA6NCC3 632 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 GOLGA8NF8WBI6 632 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 POLBP06746 335 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 F7P08709 466 aaPredicted RBP20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 TGFB3P10600 412 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 FLOT2Q14254 428 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 EFCAB12Q6NXP0 572 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 BNC2Q6ZN30 1099 aaPredicted RBP20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 ACOT1Q86TX2 421 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 LILRA2Q8N149 483 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 TTC39CQ8N584 583 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 KYQ8NBH2 561 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 ATXN7L3BQ96GX2 97 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 FERMT1Q9BQL6 677 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 GRIP2Q9C0E4 1043 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 PDZD7Q9H5P4 517 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 FAM124BQ9H5Z6 455 aaPredicted RBP20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 DPP3Q9NY33 737 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 HACL1Q9UJ83 578 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 VPS28Q9UK41 221 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 NME7Q9Y5B8 376 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 RPS6KL1Q9Y6S9 549 aa20.02■□□□□ 0.8
PDLIM3-212ENST00000620787 RGSL1A5PLK6 1076 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 TNFAIP8O95379 198 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms