RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-229ENST00000620292 VPS45Q9NRW7 570 aa4.31□□□□□ -1.72
CBWD1-229ENST00000620292 DTNAQ9Y4J8 743 aa4.31□□□□□ -1.72
CBWD1-229ENST00000620292 COL3A1P02461 1466 aaPredicted RBP4.3□□□□□ -1.72
CBWD1-229ENST00000620292 BCORQ6W2J9 1755 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 FLT4P35916 1363 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 CCDC194A0A1B0GVG4 234 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 FAM234BA2RU67 622 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 PPP6CO00743 305 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 GLP2RO95838 553 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 COPB1P53618 953 aaKnown RBP4.3□□□□□ -1.72
CBWD1-229ENST00000620292 TXNL4AP83876 142 aaKnown RBP4.3□□□□□ -1.72
CBWD1-229ENST00000620292 TMTC4Q5T4D3 741 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 TOGARAM2Q6ZUX3 1019 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 NOL8Q76FK4 1167 aaKnown RBP4.3□□□□□ -1.72
CBWD1-229ENST00000620292 NEK8Q86SG6 692 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 C2CD5Q86YS7 1000 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 GALNT16Q8N428 558 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 MAFAQ8NHW3 353 aaPredicted RBP4.3□□□□□ -1.72
CBWD1-229ENST00000620292 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.3□□□□□ -1.72
CBWD1-229ENST00000620292 KIAA1191Q96A73 305 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 CINPQ9BW66 212 aaPredicted RBP4.3□□□□□ -1.72
CBWD1-229ENST00000620292 TAF1DQ9H5J8 278 aaPredicted RBP4.3□□□□□ -1.72
CBWD1-229ENST00000620292 CACNA1IQ9P0X4 2223 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 UBR2Q8IWV8 1755 aa4.3□□□□□ -1.72
CBWD1-229ENST00000620292 TRIOBPQ9H2D6 2365 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 AKAP11Q9UKA4 1901 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 CEP290O15078 2479 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 TMEM232C9JQI7 657 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 FYB1O15117 783 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 GCATO75600 419 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 VIPP01282 170 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 PECAM1P16284 738 aaPredicted RBP4.29□□□□□ -1.72
CBWD1-229ENST00000620292 PBX1P40424 430 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 SRSF4Q08170 494 aaKnown RBP4.29□□□□□ -1.72
CBWD1-229ENST00000620292 CCDC15Q0P6D6 951 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 HDAC1Q13547 482 aaPredicted RBP4.29□□□□□ -1.72
CBWD1-229ENST00000620292 UBE4AQ14139 1066 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 RAB30Q15771 203 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 DEFB115Q30KQ5 88 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 OLFM4Q6UX06 510 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 VSTM1Q6UX27 236 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 DCDC5Q6ZRR9 648 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 HIC2Q96JB3 615 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 RNF26Q9BY78 433 aaPredicted RBP4.29□□□□□ -1.72
CBWD1-229ENST00000620292 HELLSQ9NRZ9 838 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 TERF2IPQ9NYB0 399 aa4.29□□□□□ -1.72
CBWD1-229ENST00000620292 ABT1Q9ULW3 272 aaKnown RBP4.29□□□□□ -1.72
CBWD1-229ENST00000620292 TONSLQ96HA7 1378 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 ZNF804BA4D1E1 1349 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 SOS1Q07889 1333 aaPredicted RBP4.28□□□□□ -1.72
CBWD1-229ENST00000620292 RNF123Q5XPI4 1314 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 CUL9Q8IWT3 2517 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 CYP2D7A0A087X1C5 515 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.28□□□□□ -1.72
CBWD1-229ENST00000620292 GXYLT2A0PJZ3 443 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 PODXLO00592 558 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 CA12O43570 354 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 PRAMEF2O60811 474 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 NTSR2O95665 410 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 IFIT2P09913 472 aaKnown RBP4.28□□□□□ -1.72
CBWD1-229ENST00000620292 TMIGD3P0DMS9 266 aaPredicted RBP4.28□□□□□ -1.72
CBWD1-229ENST00000620292 ABCB4P21439 1286 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 EPHB2P29323 1055 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 MFSD13AQ14CX5 517 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 CEP78Q5JTW2 689 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 SYCP2LQ5T4T6 812 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 TMEM65Q6PI78 240 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 FBXO38Q6PIJ6 1188 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 FAM71DQ8N9W8 422 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 ZNF622Q969S3 477 aaKnown RBP eCLIP4.28□□□□□ -1.72
CBWD1-229ENST00000620292 P2RY11Q96G91 374 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 TMEM41AQ96HV5 264 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 CAPNS2Q96L46 248 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 C5orf34Q96MH7 638 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 PAAF1Q9BRP4 392 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.28□□□□□ -1.72
CBWD1-229ENST00000620292 SAP30LQ9HAJ7 183 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 MAFFQ9ULX9 164 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 CEP83Q9Y592 693 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 PCDHGB2Q9Y5G2 931 aa4.28□□□□□ -1.72
CBWD1-229ENST00000620292 KIAA0100Q14667 2235 aaKnown RBP4.27□□□□□ -1.73
CBWD1-229ENST00000620292 INO80B-WBP1J3KQ70 363 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 CLIC1O00299 241 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 ZSCAN9O15535 394 aaPredicted RBP4.27□□□□□ -1.73
CBWD1-229ENST00000620292 BCAR3O75815 825 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 SERPINB2P05120 415 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 MATN1P21941 496 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 MMP8P22894 467 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 DUSP1P28562 367 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 SERPINB3P29508 390 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 PPM1AP35813 382 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 KCNB1Q14721 858 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 DAZAP2Q15038 168 aaPredicted RBP4.27□□□□□ -1.73
CBWD1-229ENST00000620292 TRIM71Q2Q1W2 868 aaKnown RBP4.27□□□□□ -1.73
CBWD1-229ENST00000620292 ARHGAP15Q53QZ3 475 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 TMEM196Q5HYL7 178 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 XRRA1Q6P2D8 792 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 RANBP10Q6VN20 620 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 PIK3AP1Q6ZUJ8 805 aa4.27□□□□□ -1.73
CBWD1-229ENST00000620292 C1QL2Q7Z5L3 287 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms