RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 CD27P26842 260 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 RDXP35241 583 aaKnown RBP5.64□□□□□ -1.51
CBWD3-215ENST00000619322 LIG3P49916 1009 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 PEX3P56589 373 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 FANCCQ00597 558 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 TMEM62Q0P6H9 643 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 GNL2Q13823 731 aaKnown RBP5.64□□□□□ -1.51
CBWD3-215ENST00000619322 ACAP1Q15027 740 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 MANEALQ5VSG8 457 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 GRAMD4Q6IC98 578 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 LLGL2Q6P1M3 1020 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 TRIM65Q6PJ69 517 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 TMC5Q6UXY8 1006 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 KYAT3Q6YP21 454 aaKnown RBP5.64□□□□□ -1.51
CBWD3-215ENST00000619322 USP49Q70CQ1 688 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 DMRTC2Q8IXT2 367 aaPredicted RBP5.64□□□□□ -1.51
CBWD3-215ENST00000619322 MLKLQ8NB16 471 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 B3GALNT2Q8NCR0 500 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 C1orf131Q8NDD1 294 aaKnown RBP5.64□□□□□ -1.51
CBWD3-215ENST00000619322 IQCDQ96DY2 449 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 NUP58Q9BVL2 599 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 RMND1Q9NWS8 449 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 ZNF212Q9UDV6 495 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 EGFL7Q9UHF1 273 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 TLR6Q9Y2C9 796 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 TBC1D30Q9Y2I9 924 aa5.64□□□□□ -1.51
CBWD3-215ENST00000619322 TNRC6AQ8NDV7 1962 aaKnown RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 EME2A4GXA9 379 aaPredicted RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 PRR19A6NJB7 356 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 KCNU1A8MYU2 1149 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 CALUO43852 315 aaPredicted RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 HUS1O60921 280 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 VNN1O95497 513 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 LSM8O95777 96 aaKnown RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 CXCL8P10145 99 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 PTPN1P18031 435 aaKnown RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 GDI1P31150 447 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 CHRNA4P43681 627 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 KIF11P52732 1056 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 GPLD1P80108 840 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 ZNF33AQ06730 810 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 TTC31Q49AM3 519 aaPredicted RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 BRMS1LQ5PSV4 323 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 HECTD3Q5T447 861 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 AFMIDQ63HM1 303 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 TRIM72Q6ZMU5 477 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 IQUBQ8NA54 791 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 ANKRD52Q8NB46 1076 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 RIN3Q8TB24 985 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 VOPP1Q96AW1 172 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 PAGE5Q96GU1 130 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 GSDMAQ96QA5 445 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 KIFC3Q9BVG8 833 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 GBP3Q9H0R5 595 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 EPB41L1Q9H4G0 881 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 TMEM165Q9HC07 324 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 PARP2Q9UGN5 583 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 APOBEC2Q9Y235 224 aaKnown RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 OR51B4Q9Y5P0 310 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 MN1Q10571 1320 aaPredicted RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 CPAMD8Q8IZJ3 1885 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 KLHL33A6NCF5 533 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 GOLGA6L19H0YKK7 550 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 EIF1AYO14602 144 aaKnown RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 VEGFDO43915 354 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 TBCAO75347 108 aaKnown RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 EGFP01133 1207 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 CD6P30203 668 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 TXKP42681 527 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 IFNAR2P48551 515 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 GALK1P51570 392 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 COG7P83436 770 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 TRA2AQ13595 282 aaKnown RBP eCLIP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 PEX6Q13608 980 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 KCTD19Q17RG1 926 aaPredicted RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 FKBP15Q5T1M5 1219 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 KIAA1161Q6NSJ0 714 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 SND1Q7KZF4 910 aaKnown RBP eCLIP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 ABI3BPQ7Z7G0 1075 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 GPBP1Q86WP2 473 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 REXO1L1PQ8IX06 675 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 HOMEZQ8IX15 550 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 AVL9Q8NBF6 648 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 ZMIZ2Q8NF64 920 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 MICAL1Q8TDZ2 1067 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 ZBTB10Q96DT7 871 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 DHTKD1Q96HY7 919 aaPredicted RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 PPP1R13BQ96KQ4 1090 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 MRGPRX3Q96LB0 322 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 GDAP1L1Q96MZ0 367 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 MIS12Q9H081 205 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 RAB33BQ9H082 229 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 CDH19Q9H159 772 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 DUS2Q9NX74 493 aaKnown RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 IFNKQ9P0W0 207 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 PDP2Q9P2J9 529 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 GDF2Q9UK05 429 aaPredicted RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 HS3ST2Q9Y278 367 aa5.63□□□□□ -1.51
CBWD3-215ENST00000619322 MTF2Q9Y483 593 aaPredicted RBP5.63□□□□□ -1.51
CBWD3-215ENST00000619322 ADARB2-AS1A8MUL3 147 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms