RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 PRICKLE1Q96MT3 831 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-219ENST00000617757 FAM118BQ9BPY3 351 aa8.3□□□□□ -1.08
TARDBP-219ENST00000617757 FRMD8P1Q9BZ68 369 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-219ENST00000617757 KLC2Q9H0B6 622 aa8.3□□□□□ -1.08
TARDBP-219ENST00000617757 DDX47Q9H0S4 455 aaKnown RBP8.3□□□□□ -1.08
TARDBP-219ENST00000617757 LRRC19Q9H756 370 aa8.3□□□□□ -1.08
TARDBP-219ENST00000617757 UBE2ZQ9H832 354 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-219ENST00000617757 HOMER3Q9NSC5 361 aa8.3□□□□□ -1.08
TARDBP-219ENST00000617757 TMEM248Q9NWD8 314 aa8.3□□□□□ -1.08
TARDBP-219ENST00000617757 OBP2AQ9NY56 170 aa8.3□□□□□ -1.08
TARDBP-219ENST00000617757 DTLQ9NZJ0 730 aa8.3□□□□□ -1.08
TARDBP-219ENST00000617757 TBC1D14Q9P2M4 693 aa8.3□□□□□ -1.08
TARDBP-219ENST00000617757 HEY1Q9Y5J3 304 aa8.3□□□□□ -1.08
TARDBP-219ENST00000617757 XIRP2A4UGR9 3374 aa8.3□□□□□ -1.08
TARDBP-219ENST00000617757 COL4A2P08572 1712 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 HEPACAM2A8MVW5 462 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 SLC9A3R1O14745 358 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 LIASO43766 372 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 TBL1XO60907 577 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 CLDN11O75508 207 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 MAP3K6O95382 1288 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 KCNA5P22460 613 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 CHRNA3P32297 505 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 SERPINB6P35237 376 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 COILP38432 576 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 KCNJ1P48048 391 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 MAPKAPK2P49137 400 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 VCPP55072 806 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 CDH4P55283 916 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 EIF3EP60228 445 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 RPS24P62847 133 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 XRCC4Q13426 336 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 SMAD4Q13485 552 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 SNX1Q13596 522 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 OASLQ15646 514 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 MPPE1Q53F39 396 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 TTC39BQ5VTQ0 682 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 AFMIDQ63HM1 303 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 DRICH1Q6PGQ1 229 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 CCDC137Q6PK04 289 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 VITQ6UXI7 678 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 BZW1Q7L1Q6 419 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 CHST9Q7L1S5 443 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 TFAP2DQ7Z6R9 452 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 ARHGAP12Q8IWW6 846 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 TP53INP2Q8IXH6 220 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 KLHL7Q8IXQ5 586 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 ADGRG2Q8IZP9 1017 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 UMODL1-AS1Q8N2C9 162 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 NPWQ8N729 165 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 TDRD5Q8NAT2 981 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 NOA1Q8NC60 698 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 HJURPQ8NCD3 748 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 SLC35B2Q8TB61 432 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 BPIFB1Q8TDL5 484 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 DDI1Q8WTU0 396 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 OSCP1Q8WVF1 389 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 ATG4AQ8WYN0 398 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 E2F7Q96AV8 911 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 ELSPBP1Q96BH3 223 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 OTUB2Q96DC9 234 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 TMA16Q96EY4 203 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 P2RY11Q96G91 374 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 OLFM3Q96PB7 478 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 KRT12Q99456 494 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 PLA2G2FQ9BZM2 168 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 SLC39A8Q9C0K1 460 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 LINC00597Q9H2U6 94 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 NOL6Q9H6R4 1146 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 ZFP14Q9HCL3 533 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 EPS15L1Q9UBC2 864 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 PCYOX1Q9UHG3 505 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 DNPEPQ9ULA0 475 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 DRG1Q9Y295 367 aaKnown RBP8.29□□□□□ -1.08
TARDBP-219ENST00000617757 RAD54BQ9Y620 910 aa8.29□□□□□ -1.08
TARDBP-219ENST00000617757 A0A1B0GVM2 712 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 TYW5A2RUC4 315 aaKnown RBP8.28□□□□□ -1.08
TARDBP-219ENST00000617757 TCAF2A6NFQ2 919 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 EFCAB8A8MWE9 144 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 H7C0C1 242 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 MCF2LO15068 1137 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 NCAM2O15394 837 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 ITGAVP06756 1048 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 RBP3P10745 1247 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 OR1E1P30953 314 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 PTGIRP43119 386 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 ATP5OP48047 213 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 IFNAR2P48551 515 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 FNTAP49354 379 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 GALNT2Q10471 571 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 BYSLQ13895 437 aaKnown RBP8.28□□□□□ -1.08
TARDBP-219ENST00000617757 PDK1Q15118 436 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 EML3Q32P44 896 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 MPP7Q5T2T1 576 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 FYB2Q5VWT5 728 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 RNF43Q68DV7 783 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 RHBDF2Q6PJF5 856 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 PARM1Q6UWI2 310 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 TPGS1Q6ZTW0 290 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms