RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ZNF248Q8NDW4 579 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 ZNF830Q96NB3 372 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 BAG1Q99933 345 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 XYLT2Q9H1B5 865 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 CSNK1G1Q9HCP0 422 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 CLCA2Q9UQC9 943 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 SCML2Q9UQR0 700 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 DAAM1Q9Y4D1 1078 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 MYLKQ15746 1914 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 COL6A6A6NMZ7 2263 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 A0A1W2PQJ5 194 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 ZSCAN12O43309 604 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 WNT1P04628 370 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 TRIM49P0CI25 452 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 TRIM49CP0CI26 452 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 C7P10643 843 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 KRT10P13645 584 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 CCDC130P13994 396 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 RPS14P62263 151 aaKnown RBP18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 C10orf120Q5SQS8 335 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 KIAA0895LQ68EN5 471 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 ACOT1Q86TX2 421 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 PARD3BQ8TEW8 1205 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 TTC9Q92623 222 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 TNIP3Q96KP6 325 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 TMEM245Q9H330 911 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 MMRN2Q9H8L6 949 aa18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRAPPC3-209ENST00000616395 A0A1W2PQH9 124 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 TIMM44O43615 452 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 MFAP3LO75121 409 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 CLSTN1O94985 981 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 STAU1O95793 577 aaKnown RBP18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 DNTTP04053 509 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 CHKAP35790 457 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 UCNP55089 124 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 INSM1Q01101 510 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 ILKQ13418 452 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 BIRC3Q13489 604 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 TRPC3Q13507 836 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 FNDC3BQ53EP0 1204 aaKnown RBP18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 DCAF17Q5H9S7 520 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 MIIPQ5JXC2 388 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 C1orf220Q5T0J3 134 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 CACTIN-AS1Q8N1I8 211 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 DCBLD1Q8N8Z6 715 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 SLC2A14Q8TDB8 520 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 CPLX3Q8WVH0 158 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 RFFLQ8WZ73 363 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 SGK2Q9HBY8 427 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 CAPN11Q9UMQ6 739 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 SPTA1P02549 2419 aa18.3■□□□□ 0.52
TRAPPC3-209ENST00000616395 A0A1W2PPC4 97 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 GOLGA6L9A6NEM1 432 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 FAM47DPA6NHR8 397 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 IPO7O95373 1038 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 EPHA8P29322 1005 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 CASP14P31944 242 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 KRT9P35527 623 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 PCBP4P57723 403 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 ZBED6P86452 979 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 ZBTB16Q05516 673 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 KDM7AQ6ZMT4 941 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 TMTC1Q8IUR5 882 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 OR8K1Q8NGG5 319 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 KIAA1524Q8TCG1 905 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 CYB5D2Q8WUJ1 264 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 JAKMIP2Q96AA8 810 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 HIC2Q96JB3 615 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 SDCBP2Q9H190 292 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 KCNF1Q9H3M0 494 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 AGO1Q9UL18 857 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 ZNF510Q9Y2H8 683 aa18.29■□□□□ 0.52
TRAPPC3-209ENST00000616395 GTPBP10A4D1E9 387 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 PHACTR2O75167 634 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 VNN1O95497 513 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 CYBBP04839 570 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 HMBSP08397 361 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 CKMT2P17540 419 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 CORO1AP31146 461 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 ATICP31939 592 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 ENPEPQ07075 957 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 LRMPQ12912 555 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 DNTTIP2Q5QJE6 756 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 SCARA5Q6ZMJ2 495 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 GBP6Q6ZN66 633 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 SKA1Q96BD8 255 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 MED8Q96G25 268 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 SLC2A11Q9BYW1 496 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 EBF2Q9HAK2 575 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 PRSS16Q9NQE7 514 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 PLXNA2O75051 1894 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 MYH10P35580 1976 aa18.28■□□□□ 0.52
TRAPPC3-209ENST00000616395 HHLA1C9JL84 531 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 WNT9AO14904 365 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 YKT6O15498 198 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 C4BPAP04003 597 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 TUBB4AP04350 444 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 CSRP3P50461 194 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 ADKP55263 362 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms