RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 GBE1Q04446 702 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 DGKZQ13574 1117 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 NOMO1Q15155 1222 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 GEN1Q17RS7 908 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 LSM12Q3MHD2 195 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 MGAT5BQ3V5L5 792 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 GLRA4Q5JXX5 417 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 GK5Q6ZS86 529 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TMEM26Q6ZUK4 368 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 C4orf19Q8IY42 314 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 SLC7A5P1Q8MH63 180 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 BBS5Q8N3I7 341 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 WDTC1Q8N5D0 677 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 GMCL1P1Q8NEA9 526 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 MCPH1Q8NEM0 835 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 DQX1Q8TE96 717 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 ZNF669Q96BR6 464 aaPredicted RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 NGLY1Q96IV0 654 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 KLHL32Q96NJ5 620 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 SLC29A1Q99808 456 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 MTG1Q9BT17 334 aaPredicted RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 NIF3L1Q9GZT8 377 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 ZNF696Q9H7X3 374 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 CXorf21Q9HAI6 301 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 INIPQ9NRY2 104 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TLK1Q9UKI8 766 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TMA7Q9Y2S6 64 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 A0A096LPK6 155 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 HMX2A2RU54 273 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TMEM247A6NEH6 219 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 KCNU1A8MYU2 1149 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 KPNA7A9QM74 516 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 DHX15O43143 795 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 PHGDHO43175 533 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 KCNH1O95259 989 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 VAPBO95292 243 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TRUB2O95900 331 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 PORP16435 677 aaPredicted RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 ZNF23P17027 643 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 ARRB2P32121 409 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 CD97P48960 835 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 OXCT1P55809 520 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TSPY1Q01534 308 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 SLC10A2Q12908 348 aaPredicted RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 MTA1Q13330 715 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TUBB3Q13509 450 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 OLIG2Q13516 323 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 DGKDQ16760 1214 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 DCAF6Q58WW2 860 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 STRA8Q7Z7C7 330 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 HERC6Q8IVU3 1022 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 PLD6Q8N2A8 252 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 CENPSQ8N2Z9 138 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 CNDP1Q96KN2 507 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 BRD8Q9H0E9 1235 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 RBM38Q9H0Z9 239 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 CDH19Q9H159 772 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 CLK4Q9HAZ1 481 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 WDR37Q9Y2I8 494 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TBC1D30Q9Y2I9 924 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 PMM2O15305 246 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 LTFP02788 710 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 MT-ND1P03886 318 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 ERBB2P04626 1255 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 ZNF182P17025 639 aaPredicted RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 PPARGP37231 505 aaPredicted RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 PHKA2P46019 1235 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 JAK3P52333 1124 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 POU5F1BQ06416 359 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 CD300CQ08708 224 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 PLCL1Q15111 1095 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 MAPK11Q15759 364 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 DUOXA2Q1HG44 320 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 AGKQ53H12 422 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 FGD3Q5JSP0 725 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TMEM214Q6NUQ4 689 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 SETD3Q86TU7 594 aaPredicted RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 SIX6OS1Q8N1H7 587 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TMCO5AQ8N6Q1 288 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 PLD5Q8N7P1 536 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 C7orf31Q8N865 590 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 SLC7A3Q8WY07 619 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 LPGAT1Q92604 370 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 DCPSQ96C86 337 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 ISOC1Q96CN7 298 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 PLEKHA8Q96JA3 519 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 RNF157Q96PX1 679 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 SORT1Q99523 831 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 OMDQ99983 421 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 MAGEB5Q9BZ81 275 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 NDEL1Q9GZM8 345 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 UPF3AQ9H1J1 476 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 ANKEF1Q9NU02 776 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 GID8Q9NWU2 228 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 SFMBT1Q9UHJ3 866 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 DAPK2Q9UIK4 370 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 EMCNQ9ULC0 261 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 CDYLQ9Y232 598 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 RNF11Q9Y3C5 154 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 MYH9P35579 1960 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms