RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 FAM47DPA6NHR8 397 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 MID1O15344 667 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 MED7O43513 233 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 RNASEH1O60930 286 aaKnown RBP21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 IGLV3-25P01717 112 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 APOEP02649 317 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 SRPRAP08240 638 aaKnown RBP21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 ATXN1LP0C7T5 689 aaKnown RBP21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 TACR2P21452 398 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 PITX1P78337 314 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 SUZ12Q15022 739 aaKnown RBP21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 CST6Q15828 149 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 TMEM110Q86TL2 294 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 CHSY1Q86X52 802 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 MMAAQ8IVH4 418 aaKnown RBP21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 APCDD1Q8J025 514 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 ZNF606Q8WXB4 792 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 IGSF8Q969P0 613 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 CDC6Q99741 560 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 TRIM62Q9BVG3 475 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 POPDC2Q9HBU9 364 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 TJP2Q9UDY2 1190 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 ITIH6Q6UXX5 1313 aa21.49■■□□□ 1.03
TRAPPC3-208ENST00000616074 H0Y8X5 98 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 THAP12O43422 761 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 GADD45BO75293 160 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 DKK1O94907 266 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 MOCS3O95396 460 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 TRUB2O95900 331 aaKnown RBP21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 GNA15P30679 374 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 CTSKP43235 329 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 CCT8P50990 548 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 GALCP54803 685 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 ECT2LQ008S8 904 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 GJB7Q6PEY0 223 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 ADAT2Q7Z6V5 191 aaKnown RBP21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 BTN2A3PQ96KV6 586 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 SLC6A18Q96N87 628 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 NEUROG2Q9H2A3 272 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 SLCO3A1Q9UIG8 710 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 CEP83Q9Y592 693 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
TRAPPC3-208ENST00000616074 EDDM13A0A1B0GTR0 161 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 A0A1W2PPC4 97 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 TARSL2A2RTX5 802 aaKnown RBP21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 GOLGA8CPA6NN73 597 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 RNASEH2AO75792 299 aaKnown RBP21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 NUMBP49757 651 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 YWHAZP63104 245 aaKnown RBP21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 IL9RQ01113 521 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 PDCLQ13371 301 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 EIF4EBP2Q13542 120 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 TAF5Q15542 800 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 NCEH1Q6PIU2 408 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 RPL10LQ96L21 214 aaKnown RBP21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 MED15Q96RN5 788 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 CRACR2AQ9BSW2 395 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 EBF2Q9HAK2 575 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 LHX6Q9UPM6 363 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 CACNA1GO43497 2377 aa21.47■■□□□ 1.03
TRAPPC3-208ENST00000616074 PCDHGA12O60330 932 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 SLC8A1P32418 973 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 PSMD8P48556 350 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 STK19P49842 368 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 RACK1P63244 317 aaKnown RBP21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 SFSWAPQ12872 951 aaKnown RBP21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 RNF219Q5W0B1 726 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 TRIM65Q6PJ69 517 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 TMPRSS7Q7RTY8 843 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 CIR1Q86X95 450 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 AADATQ8N5Z0 425 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 PTPRN2Q92932 1015 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 FAM129BQ96TA1 746 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 PRMT1Q99873 361 aaKnown RBP21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 OMDQ99983 421 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 ACE2Q9BYF1 805 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 THAP9Q9H5L6 903 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 ADAMTS1Q9UHI8 967 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 FZD4Q9ULV1 537 aa21.46■■□□□ 1.03
TRAPPC3-208ENST00000616074 LRRC72A6NJI9 287 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 BECN2A8MW95 431 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 KCNU1A8MYU2 1149 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 F5H5T6 163 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 VILLO15195 856 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 HOXB3P14651 431 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 GRK6P43250 576 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 C21orf59P57076 290 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 APBA1Q02410 837 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 ENOSF1Q7L5Y1 443 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 STK40Q8N2I9 435 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 ATP6V0D2Q8N8Y2 350 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 OR2T34Q8NGX1 318 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 MDM1Q8TC05 714 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 CCDC86Q9H6F5 360 aaKnown RBP21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 FAM204AQ9H8W3 233 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 ADAMTS20P59510 1910 aa21.45■■□□□ 1.02
TRAPPC3-208ENST00000616074 C10orf142B7Z368 130 aa21.44■■□□□ 1.02
TRAPPC3-208ENST00000616074 TNFSF14O43557 240 aa21.44■■□□□ 1.02
TRAPPC3-208ENST00000616074 WNT1P04628 370 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms