RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 GIPC1O14908 333 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 GLRA3O75311 464 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 THRAP10827 490 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 CDH2P19022 906 aaPredicted RBP13.47□□□□□ -0.25
MSH6-214ENST00000616033 MX2P20592 715 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 SFNP31947 248 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 ZNF667Q5HYK9 610 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 OGFRL1Q5TC84 451 aaPredicted RBP13.47□□□□□ -0.25
MSH6-214ENST00000616033 HEATR6Q6AI08 1181 aaKnown RBP13.47□□□□□ -0.25
MSH6-214ENST00000616033 FAM160B2Q86V87 743 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 PCDH19Q8TAB3 1148 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 THAP11Q96EK4 314 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 SIGLEC10Q96LC7 697 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 OMDQ99983 421 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 WDR41Q9HAD4 459 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 PXMP2Q9NR77 195 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 UBP1Q9NZI7 540 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 V9GYQ6 96 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 PLOD2O00469 737 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 HSD17B4P51659 736 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 ADGRE1Q14246 886 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 PRAMEF18Q5VWM3 479 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 CCDC80Q76M96 950 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 KLHL32Q96NJ5 620 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 AGAP2Q99490 1192 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 LPIN3Q9BQK8 851 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 NOL11Q9H8H0 719 aaKnown RBP13.47□□□□□ -0.25
MSH6-214ENST00000616033 RNF146Q9NTX7 359 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 GMPR2Q9P2T1 348 aaKnown RBP13.47□□□□□ -0.25
MSH6-214ENST00000616033 NFASCO94856 1347 aa13.47□□□□□ -0.25
MSH6-214ENST00000616033 J3QRK9 145 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 PHGDHO43175 533 aaKnown RBP13.46□□□□□ -0.25
MSH6-214ENST00000616033 MICAL2O94851 1124 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 JUNP05412 331 aaKnown RBP13.46□□□□□ -0.25
MSH6-214ENST00000616033 GSTT2P0CG29 244 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 GSTT2BP0CG30 244 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 TPH1P17752 444 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 GPD1P21695 349 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 NAGLUP54802 743 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 NR1H2P55055 460 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 TGFB2P61812 414 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 CD300CQ08708 224 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 STILQ15468 1287 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 OGFOD2Q6N063 350 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 C16orf87Q6PH81 154 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 RPS27LQ71UM5 84 aaKnown RBP13.46□□□□□ -0.25
MSH6-214ENST00000616033 UBR7Q8N806 425 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 NAT16Q8N8M0 369 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 RNF149Q8NC42 400 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 FLAD1Q8NFF5 587 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 FBXL8Q96CD0 374 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 ATG4CQ96DT6 458 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 BTBD9Q96Q07 612 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 THSD7AQ9UPZ6 1657 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 TCRBV5S1A1TA0A578 114 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 TMEM247A6NEH6 219 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 A8MU76 341 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 C9JVG2 144 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 TK2O00142 265 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 KCNK1O00180 336 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 FBXO21O94952 628 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 CXCL8P10145 99 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 TAP1Q03518 808 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 AMHR2Q16671 573 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 RNF135Q8IUD6 432 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 SLC15A3Q8IY34 581 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 FAM47BQ8NA70 645 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 PDCD6IPQ8WUM4 868 aaKnown RBP13.46□□□□□ -0.25
MSH6-214ENST00000616033 ZNF669Q96BR6 464 aaPredicted RBP13.46□□□□□ -0.25
MSH6-214ENST00000616033 SLC39A3Q9BRY0 314 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 NTPCRQ9BSD7 190 aaKnown RBP13.46□□□□□ -0.25
MSH6-214ENST00000616033 CCDC28BQ9BUN5 200 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 SLC39A10Q9ULF5 831 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 CDC14AQ9UNH5 594 aa13.46□□□□□ -0.25
MSH6-214ENST00000616033 CENPFP49454 3210 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 PAPSS1O43252 624 aaPredicted RBP13.46□□□□□ -0.26
MSH6-214ENST00000616033 AKAP10O43572 662 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 TNNC2P02585 160 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 ITGB3P05106 788 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 CCDC166P0CW27 439 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 ZFXP17010 805 aaPredicted RBP13.46□□□□□ -0.26
MSH6-214ENST00000616033 UGT1A6P19224 532 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 NDST2P52849 883 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 OXCT1P55809 520 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 LSM12Q3MHD2 195 aaKnown RBP13.46□□□□□ -0.26
MSH6-214ENST00000616033 TRNP1Q6NT89 227 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 GK5Q6ZS86 529 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 ARCQ7LC44 396 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 ADGRG6Q86SQ4 1221 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 PATL1Q86TB9 770 aaKnown RBP13.46□□□□□ -0.26
MSH6-214ENST00000616033 PYROXD2Q8N2H3 581 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 MARVELD2Q8N4S9 558 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 ZFRQ96KR1 1074 aaKnown RBP13.46□□□□□ -0.26
MSH6-214ENST00000616033 APBA2Q99767 749 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 SDCBP2Q9H190 292 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 TASP1Q9H6P5 420 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 SFMBT1Q9UHJ3 866 aa13.46□□□□□ -0.26
MSH6-214ENST00000616033 B4GALT5O43286 388 aa13.45□□□□□ -0.26
MSH6-214ENST00000616033 TIPRLO75663 272 aa13.45□□□□□ -0.26
MSH6-214ENST00000616033 PIGNO95427 931 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms