RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 SEMA4BQ9NPR2 832 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 NECTIN3Q9NQS3 549 aa2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 PAPOLBQ9NRJ5 636 aaKnown RBP2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 HELLSQ9NRZ9 838 aa2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 TM7SF3Q9NS93 570 aa2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 TMEM184CQ9NVA4 438 aa2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 TMEM45AQ9NWC5 275 aa2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 ZMYND8Q9ULU4 1186 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 FAM50BQ9Y247 325 aa2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 UBE2J1Q9Y385 318 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 HEMK1Q9Y5R4 338 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 ITIH6Q6UXX5 1313 aa2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 EMSYQ7Z589 1322 aa2.92□□□□□ -1.94
HMGB1P24-202ENST00000615653 RASA4BC9J798 803 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 PRYO14603 147 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 ZSCAN9O15535 394 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 RASA4O43374 803 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 TLX3O43711 291 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 MTA2O94776 668 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 GLP2RO95838 553 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 YY1P25490 414 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 HOXA7P31268 230 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 SLC8A1P32418 973 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 CTNNA1P35221 906 aaKnown RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 IL6STP40189 918 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 VPS41P49754 854 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 CLK1P49759 484 aaKnown RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 ZNF131P52739 623 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 HILS1P60008 231 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 WASHC5Q12768 1159 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 MTA1Q13330 715 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 MTX1Q13505 466 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 SEMA3AQ14563 771 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 PSMD6Q15008 389 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 MAPKAPK3Q16644 382 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 ARL13BQ3SXY8 428 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 TTC31Q49AM3 519 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 CCDC184Q52MB2 194 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 ACSM6Q6P461 480 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 LVRNQ6Q4G3 990 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 FOXP4Q8IVH2 680 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 MMP21Q8N119 569 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 OR8H2Q8N162 312 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 OTUD6BQ8N6M0 293 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 SLC44A5Q8NCS7 719 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 ADPRHL1Q8NDY3 354 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 WIPF2Q8TF74 440 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 POF1BQ8WVV4 589 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 ZFPM2Q8WW38 1151 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 IGFBPL1Q8WX77 278 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 KAT2BQ92831 832 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 CELF1Q92879 486 aaKnown RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 ATP6V1E2Q96A05 226 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 PRR11Q96HE9 360 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 SERINC2Q96SA4 455 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 GDF15Q99988 308 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 NUDT16L1Q9BRJ7 211 aaKnown RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 PAAF1Q9BRP4 392 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 SEZ6LQ9BYH1 1024 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 TSPY26PQ9H489 355 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 AGO4Q9HCK5 861 aaKnown RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 KCNK9Q9NPC2 374 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 SH3GLB2Q9NR46 395 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 ASNSD1Q9NWL6 643 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 RGL1Q9NZL6 768 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 IPO11Q9UI26 975 aaKnown RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 PHTF1Q9UMS5 762 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 MAN2B2Q9Y2E5 1009 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 SLC45A1Q9Y2W3 748 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 PCDHB2Q9Y5E7 798 aa2.91□□□□□ -1.94
HMGB1P24-202ENST00000615653 ABHD14A-ACY1A0A1B0GW23 586 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 SLC22A23A1A5C7 686 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 FAM90A8PA6NJQ4 464 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 J3KRW8 73 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 GTPBP1O00178 669 aaKnown RBP2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 NTN3O00634 580 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 APAF1O14727 1248 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 PRPF4O43172 522 aaKnown RBP eCLIP2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 CTIFO43310 598 aaKnown RBP2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 MBD4O95243 580 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 AGR2O95994 175 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 ENO1P06733 434 aaKnown RBP2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 TPM2P07951 284 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 FAM90A13PP0C7W8 464 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 FAM90A24PP0C7X0 464 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 PSG1P11464 419 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 CYP19A1P11511 503 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 AKR1A1P14550 325 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 TNFSF4P23510 183 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 TBXAS1P24557 533 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 IDUAP35475 653 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 GRK6P43250 576 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 SOX2P48431 317 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 ALDH7A1P49419 539 aaKnown RBP2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 ZNF84P51523 738 aa2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 CLNS1AP54105 237 aaKnown RBP2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 NAP1L1P55209 391 aaKnown RBP2.9□□□□□ -1.95
HMGB1P24-202ENST00000615653 PLIN5Q00G26 463 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms