RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 A0A0J9YVX5 310 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 ANKRD33BA6NCL7 494 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 CLIC3O95833 236 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 IRF9Q00978 393 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 TMEM62Q0P6H9 643 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 MAPK11Q15759 364 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 CARTPTQ16568 116 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 ATF7IP2Q5U623 682 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 XKR5Q6UX68 686 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 C15orf52Q6ZUT6 534 aaKnown RBP12.04□□□□□ -0.48
CDH5-208ENST00000614547 CPB2Q96IY4 423 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 PIWIL1Q96J94 861 aaKnown RBP12.04□□□□□ -0.48
CDH5-208ENST00000614547 POPDC2Q9HBU9 364 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 SYBUQ9NX95 663 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 GGA3Q9NZ52 723 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 TK2O00142 265 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 RNF103O00237 685 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 HSPA8P11142 646 aaKnown RBP12.04□□□□□ -0.48
CDH5-208ENST00000614547 FUT4P22083 530 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
CDH5-208ENST00000614547 GRIA3P42263 894 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 GMPSP49915 693 aaPredicted RBP12.04□□□□□ -0.48
CDH5-208ENST00000614547 STXBP2Q15833 593 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 ZIK1Q3SY52 487 aaPredicted RBP12.04□□□□□ -0.48
CDH5-208ENST00000614547 EEF1DP3Q658K8 133 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 OFCC1Q8IZS5 231 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 NDRG1Q92597 394 aaKnown RBP12.04□□□□□ -0.48
CDH5-208ENST00000614547 TMEM176AQ96HP8 235 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 ZNF518BQ9C0D4 1074 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 NMRAL1Q9HBL8 299 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 COPG2Q9UBF2 871 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 ITGA11Q9UKX5 1188 aa12.04□□□□□ -0.48
CDH5-208ENST00000614547 J3QRK9 145 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 TRDMT1O14717 391 aaKnown RBP12.03□□□□□ -0.48
CDH5-208ENST00000614547 TGFB2P61812 414 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 FAM160B1Q5W0V3 765 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 PYROXD2Q8N2H3 581 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 FBXL8Q96CD0 374 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 CDHR1Q96JP9 859 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 TWNKQ96RR1 684 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 AGAP2Q99490 1192 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 SEPHS2Q99611 448 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 ITGB4P16144 1822 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 KCNU1A8MYU2 1149 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 TMEM233B4DJY2 109 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 DDNO94850 711 aaPredicted RBP12.03□□□□□ -0.48
CDH5-208ENST00000614547 NFICP08651 508 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 HDCP19113 662 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 GP5P40197 560 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 GRIA4P48058 902 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 C21orf59P57076 290 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 CNTN2Q02246 1040 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 MPP3Q13368 585 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 PLCL1Q15111 1095 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 STILQ15468 1287 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 NBPF12Q5TAG4 269 aaPredicted RBP12.03□□□□□ -0.48
CDH5-208ENST00000614547 IL23RQ5VWK5 629 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 MOB2Q70IA6 237 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 ARCQ7LC44 396 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 XYLT1Q86Y38 959 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 BRSK2Q8IWQ3 736 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 GABPB2Q8TAK5 448 aaPredicted RBP12.03□□□□□ -0.48
CDH5-208ENST00000614547 PBXIP1Q96AQ6 731 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 WNK4Q96J92 1243 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 ELMO2Q96JJ3 720 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 PLEKHG4BQ96PX9 1271 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 PEBP4Q96S96 227 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 LPIN3Q9BQK8 851 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 STRA6Q9BX79 667 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 FAM49AQ9H0Q0 323 aaPredicted RBP12.03□□□□□ -0.48
CDH5-208ENST00000614547 PHF24Q9UPV7 400 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 MFHAS1Q9Y4C4 1052 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 ZBTB14O43829 449 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 VAPBO95292 243 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 PCSK6P29122 969 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 PTGER2P43116 358 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 NAMPTP43490 491 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 TSPY1Q01534 308 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 TRIM16LQ309B1 348 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 CHST15Q7LFX5 561 aaPredicted RBP12.03□□□□□ -0.48
CDH5-208ENST00000614547 WDTC1Q8N5D0 677 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.03□□□□□ -0.48
CDH5-208ENST00000614547 KCTD4Q8WVF5 259 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 FAM151AQ8WW52 585 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 HTR3CQ8WXA8 447 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 VPS50Q96JG6 964 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 SLC39A3Q9BRY0 314 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 SNX25Q9H3E2 840 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 POLR1BQ9H9Y6 1135 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 LRRC4Q9HBW1 653 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 UBAP1Q9NZ09 502 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 SMCHD1A6NHR9 2005 aa12.03□□□□□ -0.48
CDH5-208ENST00000614547 RGSL1A5PLK6 1076 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 CAPN14A8MX76 684 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 PARNO95453 639 aaKnown RBP12.02□□□□□ -0.48
CDH5-208ENST00000614547 SUPT20HL2P0C7V6 817 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 GOT1P17174 413 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 YAP1P46937 504 aaKnown RBP12.02□□□□□ -0.48
CDH5-208ENST00000614547 SULT1E1P49888 294 aa12.02□□□□□ -0.48
CDH5-208ENST00000614547 CAPSQ13938 189 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms