RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 C1orf216Q8TAB5 229 aa17.71■□□□□ 0.43
CCL3-204ENST00000613922 ZDHHC5Q9C0B5 715 aa17.71■□□□□ 0.43
CCL3-204ENST00000613922 MTG2Q9H4K7 406 aa17.71■□□□□ 0.43
CCL3-204ENST00000613922 TMEM131Q92545 1883 aa17.71■□□□□ 0.43
CCL3-204ENST00000613922 SYNJ2BP-COX16A0A087WUM0 186 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 DNTTP04053 509 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 SCNN1AP37088 669 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 CTSOP43234 321 aaPredicted RBP17.7■□□□□ 0.42
CCL3-204ENST00000613922 PLK1P53350 603 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 ECT2LQ008S8 904 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 RABGAP1LQ5R372 815 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 OTUD1Q5VV17 481 aaPredicted RBP17.7■□□□□ 0.42
CCL3-204ENST00000613922 CDKAL1Q5VV42 579 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 APCDD1Q8J025 514 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 CCAR2Q8N163 923 aaKnown RBP17.7■□□□□ 0.42
CCL3-204ENST00000613922 ZCCHC9Q8N567 271 aaKnown RBP17.7■□□□□ 0.42
CCL3-204ENST00000613922 GPT2Q8TD30 523 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 STK33Q9BYT3 514 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 SLC32A1Q9H598 525 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 C6orf106Q9H6K1 298 aaPredicted RBP17.7■□□□□ 0.42
CCL3-204ENST00000613922 SYNCQ9H7C4 482 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 TAB2Q9NYJ8 693 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 RRN3Q9NYV6 651 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 COX16Q9P0S2 106 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 SCML1Q9UN30 329 aa17.7■□□□□ 0.42
CCL3-204ENST00000613922 FRYQ5TBA9 3013 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 A0A1B0GVM2 712 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 TARSL2A2RTX5 802 aaKnown RBP17.69■□□□□ 0.42
CCL3-204ENST00000613922 TCAF2A6NFQ2 919 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 PES1O00541 588 aaKnown RBP17.69■□□□□ 0.42
CCL3-204ENST00000613922 BCAT2O15382 392 aaPredicted RBP17.69■□□□□ 0.42
CCL3-204ENST00000613922 SIN3BO75182 1162 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 CD59P13987 128 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 MATKP42679 507 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 GRIK2Q13002 908 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 TTC31Q49AM3 519 aaPredicted RBP17.69■□□□□ 0.42
CCL3-204ENST00000613922 C5orf22Q49AR2 442 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 C9orf64Q5T6V5 341 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 FBXL22Q6P050 247 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 USP30Q70CQ3 517 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 CIR1Q86X95 450 aaPredicted RBP17.69■□□□□ 0.42
CCL3-204ENST00000613922 OR2I1PQ8NGU4 316 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 RNF34Q969K3 372 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 NT5C3BQ969T7 300 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 NPY6RQ99463 290 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 ADAM33Q9BZ11 813 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 BTBD1Q9H0C5 482 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 GANQ9H2C0 597 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 PABPC3Q9H361 631 aaKnown RBP17.69■□□□□ 0.42
CCL3-204ENST00000613922 SGK2Q9HBY8 427 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 EIF2B4Q9UI10 523 aaKnown RBP17.69■□□□□ 0.42
CCL3-204ENST00000613922 WASF3Q9UPY6 502 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 HS3ST4Q9Y661 456 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 PLXNA2O75051 1894 aa17.69■□□□□ 0.42
CCL3-204ENST00000613922 TTC34A8MYJ7 566 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 F8VZ95 297 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 M0QYT0 321 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 SEMA4FO95754 770 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 PDGFRAP16234 1089 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 VASPP50552 380 aaPredicted RBP17.68■□□□□ 0.42
CCL3-204ENST00000613922 OXCT1P55809 520 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 NME3Q13232 169 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 SLC14A1Q13336 389 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 AUHQ13825 339 aaKnown RBP17.68■□□□□ 0.42
CCL3-204ENST00000613922 KRT31Q15323 416 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 CXorf57Q6NSI4 855 aaKnown RBP17.68■□□□□ 0.42
CCL3-204ENST00000613922 NOP9Q86U38 636 aaKnown RBP17.68■□□□□ 0.42
CCL3-204ENST00000613922 DHX40Q8IX18 779 aaKnown RBP17.68■□□□□ 0.42
CCL3-204ENST00000613922 IGSF8Q969P0 613 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 C18orf8Q96DM3 657 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 PGAP3Q96FM1 320 aaPredicted RBP17.68■□□□□ 0.42
CCL3-204ENST00000613922 MIR1-1HGQ9H1L0 117 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 PDCL3Q9H2J4 239 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 PIGVQ9NUD9 493 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 ARHGEF38Q9NXL2 777 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCL3-204ENST00000613922 SLCO3A1Q9UIG8 710 aa17.68■□□□□ 0.42
CCL3-204ENST00000613922 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.68■□□□□ 0.42
CCL3-204ENST00000613922 EDDM13A0A1B0GTR0 161 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 RNASEH1O60930 286 aaKnown RBP17.67■□□□□ 0.42
CCL3-204ENST00000613922 LSM8O95777 96 aaKnown RBP17.67■□□□□ 0.42
CCL3-204ENST00000613922 TFE3P19532 575 aaPredicted RBP17.67■□□□□ 0.42
CCL3-204ENST00000613922 MZF1P28698 734 aaPredicted RBP17.67■□□□□ 0.42
CCL3-204ENST00000613922 CXCR3P49682 368 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 BNC1Q01954 994 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 CENPCQ03188 943 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 SULT2A1Q06520 285 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 BRMS1LQ5PSV4 323 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 TAF3Q5VWG9 929 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 ERICH1Q86X53 443 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 XYLT1Q86Y38 959 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 EPS8L1Q8TE68 723 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 PTPRN2Q92932 1015 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 ALG14Q96F25 216 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 RPL10LQ96L21 214 aaKnown RBP17.67■□□□□ 0.42
CCL3-204ENST00000613922 RPRD1AQ96P16 312 aaPredicted RBP17.67■□□□□ 0.42
CCL3-204ENST00000613922 GBP4Q96PP9 640 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 FAM129BQ96TA1 746 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 VPS16Q9H269 839 aa17.67■□□□□ 0.42
CCL3-204ENST00000613922 OSGEPQ9NPF4 335 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms