RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 HLA-FP30511 346 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 OR1E1P30953 314 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 ARL4AP40617 200 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 SEC13P55735 322 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 TPI1P60174 286 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 MESP2Q0VG99 397 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 FZD5Q13467 585 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 GEN1Q17RS7 908 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 C2orf27AQ580R0 203 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 PPP6R3Q5H9R7 873 aaPredicted RBP13.65□□□□□ -0.22
MDC1-209ENST00000613547 ZFYVE27Q5T4F4 411 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 SDE2Q6IQ49 451 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 Q6ZS52 159 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 TFAP2DQ7Z6R9 452 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 SETD3Q86TU7 594 aaPredicted RBP13.65□□□□□ -0.22
MDC1-209ENST00000613547 SPEM1Q8N4L4 309 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 ZNF513Q8N8E2 541 aaPredicted RBP13.65□□□□□ -0.22
MDC1-209ENST00000613547 TEKT4Q8WW24 435 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 EZH1Q92800 747 aaPredicted RBP13.65□□□□□ -0.22
MDC1-209ENST00000613547 PEBP4Q96S96 227 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 DESI2Q9BSY9 194 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 TSGA10Q9BZW7 698 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 CATSPERBQ9H7T0 1116 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.65□□□□□ -0.22
MDC1-209ENST00000613547 SPATA6Q9NWH7 488 aaPredicted RBP13.65□□□□□ -0.22
MDC1-209ENST00000613547 GPATCH2LQ9NWQ4 482 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 ELOVL2Q9NXB9 296 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 DLGAP2Q9P1A6 1054 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 TBC1D30Q9Y2I9 924 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 REXO2Q9Y3B8 237 aaKnown RBP13.65□□□□□ -0.22
MDC1-209ENST00000613547 STARD13Q9Y3M8 1113 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 ZDBF2Q9HCK1 2354 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 PRRT4C9JH25 899 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 FAM72CH0Y354 149 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 H3BRJ5 948 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 EEF2KO00418 725 aaKnown RBP13.64□□□□□ -0.23
MDC1-209ENST00000613547 PJA2O43164 708 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 LAMTOR5O43504 91 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 SPOPO43791 374 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 CNTN5O94779 1100 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 ASLP04424 464 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 CCDC175P0C221 793 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 RARAP10276 462 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 CD70P32970 193 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 GJC1P36383 396 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 ETFBP38117 255 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 KIR2DL1P43626 348 aaPredicted RBP13.64□□□□□ -0.23
MDC1-209ENST00000613547 MAPKAPK2P49137 400 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 IRAK1P51617 712 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 CCR3P51677 355 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 ST8SIA6P61647 398 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 SLC25A11Q02978 314 aaKnown RBP13.64□□□□□ -0.23
MDC1-209ENST00000613547 LMAN2Q12907 356 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 SMTNL2Q2TAL5 461 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 ALFQ53S48 1182 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 KCNT1Q5JUK3 1230 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 EOGTQ5NDL2 527 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 FAM72AQ5TYM5 149 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 DAB2IPQ5VWQ8 1189 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 MBLAC2Q68D91 279 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 FAM72DQ6L9T8 149 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 C11orf63Q6NUN7 778 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 KIAA0907Q7Z7F0 614 aaPredicted RBP13.64□□□□□ -0.23
MDC1-209ENST00000613547 FAM72BQ86X60 149 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 PYROXD2Q8N2H3 581 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 DTWD2Q8NBA8 298 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 RPLP0P6Q8NHW5 317 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 WFDC5Q8TCV5 224 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 USP33Q8TEY7 942 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 HSPH1Q92598 858 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 PDLIM2Q96JY6 352 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 MUC3BQ9H195 1237 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 TMEM248Q9NWD8 314 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 PLA2G4CQ9UP65 541 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 ADGRG1Q9Y653 693 aa13.64□□□□□ -0.23
MDC1-209ENST00000613547 KRT86O43790 486 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 BUB1BO60566 1050 aaPredicted RBP13.63□□□□□ -0.23
MDC1-209ENST00000613547 DLDP09622 509 aaKnown RBP13.63□□□□□ -0.23
MDC1-209ENST00000613547 IL1R2P27930 398 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 HOXC13P31276 330 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 TIE1P35590 1138 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 CSKP41240 450 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 HCAR3P49019 387 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 PLK1P53350 603 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 SULT2A1Q06520 285 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 MTAPQ13126 283 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 SEMA3BQ13214 749 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 KRT81Q14533 505 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 DPYSL2Q16555 572 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 CA9Q16790 459 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 PLEKHG6Q3KR16 790 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 FUT11Q495W5 492 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 ODF2Q5BJF6 829 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 FSCBQ5H9T9 825 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 PITRM1Q5JRX3 1037 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 RNF219Q5W0B1 726 aaPredicted RBP13.63□□□□□ -0.23
MDC1-209ENST00000613547 CXorf57Q6NSI4 855 aaKnown RBP13.63□□□□□ -0.23
MDC1-209ENST00000613547 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 MAMSTRQ6ZN01 415 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 RFX8Q6ZV50 586 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms