RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	NCKAP1	Q9Y2A7	1128 aa		11.52	□□□□□ -0.57
CBWD1-222	ENST00000613508	SNX11	Q9Y5W9	270 aa		11.52	□□□□□ -0.57
CBWD1-222	ENST00000613508	EDDM13	A0A1B0GTR0	161 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	KCNU1	A8MYU2	1149 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508		E5RJQ4	531 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	CAPN9	O14815	690 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	VILL	O15195	856 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	FSBP	O95073	299 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	MOCS3	O95396	460 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	FGFR1OP	O95684	399 aa	Known RBP	11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	TRUB2	O95900	331 aa	Known RBP	11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	APOE	P02649	317 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	GLI1	P08151	1106 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	SLC2A3	P11169	496 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	KRT5	P13647	590 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	GRK6	P43250	576 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	CCR5	P51681	352 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	PLK1	P53350	603 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	GALC	P54803	685 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	MTA1	Q13330	715 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	TRIM65	Q6PJ69	517 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	TMPRSS7	Q7RTY8	843 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	CFAP52	Q8N1V2	620 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	CARNMT1	Q8N4J0	409 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	OR2T34	Q8NGX1	318 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	ADAM32	Q8TC27	787 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	RHBDD1	Q8TEB9	315 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	FAM131C	Q96AQ9	280 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	FAM129B	Q96TA1	746 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	SRRT	Q9BXP5	876 aa	Known RBP	11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	MTG2	Q9H4K7	406 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	ASNSD1	Q9NWL6	643 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	DKK4	Q9UBT3	224 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	SERGEF	Q9UGK8	458 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	XPO7	Q9UIA9	1087 aa	Known RBP	11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	RALY	Q9UKM9	306 aa	Known RBP	11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	CACNA1G	O43497	2377 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	CABIN1	Q9Y6J0	2220 aa		11.51	□□□□□ -0.57
CBWD1-222	ENST00000613508	IGSF10	Q6WRI0	2623 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508		A0A1W2PPC4	97 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	GTPBP10	A4D1E9	387 aa	Known RBP	11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	LRRC72	A6NJI9	287 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	TTC34	A8MYJ7	566 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	TNFSF14	O43557	240 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	LETM1	O95202	739 aa	Predicted RBP	11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	ATXN1L	P0C7T5	689 aa	Known RBP	11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	TACR2	P21452	398 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	C5AR1	P21730	350 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	GNA15	P30679	374 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	CTSO	P43234	321 aa	Predicted RBP	11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	CCT8	P50990	548 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	OXCT1	P55809	520 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	SULT2A1	Q06520	285 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	SCAP	Q12770	1279 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	PDCL	Q13371	301 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	KCNJ12	Q14500	433 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	ELAVL3	Q14576	367 aa	Known RBP	11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	KCNT1	Q5JUK3	1230 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	RAP1GAP2	Q684P5	730 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	MMS22L	Q6ZRQ5	1243 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	DHX40	Q8IX18	779 aa	Known RBP	11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	LGI2	Q8N0V4	545 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	SHC3	Q92529	594 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	SLC2A13	Q96QE2	648 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	ACE2	Q9BYF1	805 aa	Predicted RBP	11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	NEUROG2	Q9H2A3	272 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	TJP2	Q9UDY2	1190 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	SLCO3A1	Q9UIG8	710 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	RWDD2A	Q9UIY3	292 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	BTBD3	Q9Y2F9	522 aa		11.5	□□□□□ -0.57
CBWD1-222	ENST00000613508	SMG1	Q96Q15	3661 aa	Known RBP	11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508		A0A1B0GVM2	712 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	TCAF2	A6NFQ2	919 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	BECN2	A8MW95	431 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508		F5H5T6	163 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508		H0Y8X5	98 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	BIN1	O00499	593 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	MID1	O15344	667 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	THAP12	O43422	761 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	LAT	O43561	262 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	MOCS2	O96007	188 aa	Predicted RBP	11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	ADH1B	P00325	375 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	GOT1	P17174	413 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	CCR1	P32246	355 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	SLC8A1	P32418	973 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	STX17	P56962	302 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	SMAD1	Q15797	465 aa	Known RBP	11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	INAVA	Q3KP66	663 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	RNF219	Q5W0B1	726 aa	Predicted RBP	11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	CXorf57	Q6NSI4	855 aa	Known RBP	11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	NCEH1	Q6PIU2	408 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	LRSAM1	Q6UWE0	723 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	CHSY1	Q86X52	802 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	MMAA	Q8IVH4	418 aa	Known RBP	11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	APCDD1	Q8J025	514 aa		11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	CCAR2	Q8N163	923 aa	Known RBP	11.49	□□□□□ -0.57
CBWD1-222	ENST00000613508	WDTC1	Q8N5D0	677 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms