RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 NFKBIL1Q9UBC1 381 aaPredicted RBP17.75■□□□□ 0.43
HMGXB3-206ENST00000613459 PIPSLA2A3N6 862 aa17.75■□□□□ 0.43
HMGXB3-206ENST00000613459 PTAR1Q7Z6K3 402 aaPredicted RBP17.75■□□□□ 0.43
HMGXB3-206ENST00000613459 KIAA1210Q9ULL0 1709 aa17.75■□□□□ 0.43
HMGXB3-206ENST00000613459 MYL4P12829 197 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 PARP6Q2NL67 630 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 ZNF483Q8TF39 744 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 MTMR8Q96EF0 704 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 ADARB2Q9NS39 739 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 MBD2Q9UBB5 411 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 SPATA2Q9UM82 520 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 ASTN2O75129 1339 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 BTNL10A8MVZ5 291 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 ACKR2O00590 384 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 SNPHO15079 494 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 HOXB6P17509 224 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 TYW3Q6IPR3 259 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 YTHDF3Q7Z739 585 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 FIG4Q92562 907 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 TMEM237Q96Q45 408 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 UMODL1Q5DID0 1318 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 FGF10O15520 208 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 CCNT2O60583 730 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 MICAL2O94851 1124 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 RARRES1P49788 294 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 ORC1Q13415 861 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 EMC1Q8N766 993 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 LPCAT1Q8NF37 534 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 MRPL9Q9BYD2 267 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 PSMG1O95456 288 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 IGSF6O95976 241 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 PECAM1P16284 738 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 DSG3P32926 999 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 ELF3P78545 371 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 TCHHL1Q5QJ38 904 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 OVOS1Q6IE37 1185 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 SLC44A2Q8IWA5 706 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 ZNF75CPQ92670 426 aaPredicted RBP17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 SLITRK2Q9H156 845 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 NWD1Q149M9 1564 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 MEI4A8MW99 385 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 CYP3A4P08684 503 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 ABHD2P08910 425 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 CXCL8P10145 99 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 YY1P25490 414 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 NDST1P52848 882 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 SLC45A4Q5BKX6 768 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 MAP4K3Q8IVH8 894 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 DHRSXQ8N5I4 330 aa17.74■□□□□ 0.43
HMGXB3-206ENST00000613459 CBX4O00257 560 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 DPEP1P16444 411 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 PRKCIP41743 596 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 NEK3P51956 506 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 DGKKQ5KSL6 1271 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 TSHZ1Q6ZSZ6 1077 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 ULK2Q8IYT8 1036 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 CPB2Q96IY4 423 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 POP1Q99575 1024 aaKnown RBP17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 FDXACB1Q9BRP7 624 aaPredicted RBP17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 PLA2G4CQ9UP65 541 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 WDR27A2RRH5 827 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 DCTN2Q13561 401 aaKnown RBP17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 EPHX4Q8IUS5 362 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 FNDC5Q8NAU1 212 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 SLC35C1Q96A29 364 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 MID1IP1Q9NPA3 183 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 FAM205AQ6ZU69 1335 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 STX11O75558 287 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 RECQL5O94762 991 aaPredicted RBP17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 VTNP04004 478 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 ALDH2P05091 517 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 RARAP10276 462 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 MYL12AP19105 171 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 FKBP1AP62942 108 aaKnown RBP17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 SPANXN2Q5MJ10 180 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 MAGEC3Q8TD91 643 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 LENG9Q96B70 501 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 NOL6Q9H6R4 1146 aaKnown RBP17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 A0A088AWK7 358 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 ZW10O43264 779 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 ERBB2P04626 1255 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 ZNF10P21506 573 aaPredicted RBP17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 YWHAQP27348 245 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 ERVK-9P63128 1117 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 GSTA3Q16772 222 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 CBWD3Q5JTY5 395 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 CBWD5Q5RIA9 395 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 NET1Q7Z628 596 aaPredicted RBP17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 NECAB2Q7Z6G3 386 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 MILR1Q7Z6M3 343 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 FAM126BQ8IXS8 530 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 APOL2Q9BQE5 337 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 MTG1Q9BT17 334 aaPredicted RBP17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 TMEM134Q9H6X4 195 aa17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 RPL26L1Q9UNX3 145 aaKnown RBP17.73■□□□□ 0.43
HMGXB3-206ENST00000613459 SYNCRIPO60506 623 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 STAU1O95793 577 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 SCNN1BP51168 640 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 ZNF57Q68EA5 555 aaPredicted RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 KLHL17Q6TDP4 642 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms