RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 TRIM31Q9BZY9 425 aa20.83■□□□□ 0.92
CPNE9-205ENST00000613455 TMEM248Q9NWD8 314 aa20.83■□□□□ 0.92
CPNE9-205ENST00000613455 CFAP97Q9P2B7 532 aa20.83■□□□□ 0.92
CPNE9-205ENST00000613455 MRPS23Q9Y3D9 190 aaKnown RBP20.83■□□□□ 0.92
CPNE9-205ENST00000613455 NUP210Q8TEM1 1887 aaPredicted RBP20.83■□□□□ 0.92
CPNE9-205ENST00000613455 NYNRINQ9P2P1 1898 aaKnown RBP20.82■□□□□ 0.92
CPNE9-205ENST00000613455 TMEM265A0A087WTH1 108 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 MYBL2P10244 700 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 ETS1P14921 441 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 VAV1P15498 845 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 RBL1P28749 1068 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 TNFRSF8P28908 595 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 AVPR1AP37288 418 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 GALNT2Q10471 571 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 GRIN2CQ14957 1233 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 PDK1Q15118 436 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 PRKD1Q15139 912 aaPredicted RBP20.82■□□□□ 0.92
CPNE9-205ENST00000613455 AFMIDQ63HM1 303 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 ANKRD54Q6NXT1 300 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 HTR3DQ70Z44 454 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 TFAP2DQ7Z6R9 452 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 DDX42Q86XP3 938 aaKnown RBP eCLIP20.82■□□□□ 0.92
CPNE9-205ENST00000613455 FAM71DQ8N9W8 422 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 RIN3Q8TB24 985 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 USP13Q92995 863 aaPredicted RBP20.82■□□□□ 0.92
CPNE9-205ENST00000613455 CELF6Q96J87 481 aaKnown RBP20.82■□□□□ 0.92
CPNE9-205ENST00000613455 CDH22Q9UJ99 828 aa20.82■□□□□ 0.92
CPNE9-205ENST00000613455 HACD1B0YJ81 288 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 GFRA2O00451 464 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 TRDMT1O14717 391 aaKnown RBP20.81■□□□□ 0.92
CPNE9-205ENST00000613455 PRAMEF12O95522 483 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 KRT14P02533 472 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 TUBBP07437 444 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 ZSCAN5DPP0CG00 497 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 RPL21P46778 160 aaKnown RBP20.81■□□□□ 0.92
CPNE9-205ENST00000613455 SGSHP51688 502 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 NRLP54845 237 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 GPR149Q86SP6 731 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 CDKL3Q8IVW4 592 aaPredicted RBP20.81■□□□□ 0.92
CPNE9-205ENST00000613455 FAM217AQ8IXS0 508 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 IFT20Q8IY31 132 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 SH3RF2Q8TEC5 729 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 TFB1MQ8WVM0 346 aaKnown RBP20.81■□□□□ 0.92
CPNE9-205ENST00000613455 RSAD2Q8WXG1 361 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 RTP4Q96DX8 246 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 APOL5Q9BWW9 433 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 DPH5Q9H2P9 285 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 NOL6Q9H6R4 1146 aaKnown RBP20.81■□□□□ 0.92
CPNE9-205ENST00000613455 PCDH9Q9HC56 1237 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 ZMYM5Q9UJ78 669 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 LSM7Q9UK45 103 aaKnown RBP20.81■□□□□ 0.92
CPNE9-205ENST00000613455 CFAP69A5D8W1 941 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 IFNB1P01574 187 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 IVDP26440 423 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 CARSP49589 748 aaKnown RBP20.81■□□□□ 0.92
CPNE9-205ENST00000613455 ADAM15Q13444 863 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 CFAP52Q8N1V2 620 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 LZTR1Q8N653 840 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 ANKRD7Q92527 254 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 ASIC3Q9UHC3 531 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 SNX24Q9Y343 169 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 SH3BP1Q9Y3L3 701 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 MTCH2Q9Y6C9 303 aa20.81■□□□□ 0.92
CPNE9-205ENST00000613455 ZFP37Q9Y6Q3 630 aaPredicted RBP20.81■□□□□ 0.92
CPNE9-205ENST00000613455 CHD5Q8TDI0 1954 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 SHROOM3Q8TF72 1996 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 PPP1R12AO14974 1030 aaPredicted RBP20.8■□□□□ 0.92
CPNE9-205ENST00000613455 NCAM2O15394 837 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 KCNN4O15554 427 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 H2AFXP16104 143 aaPredicted RBP20.8■□□□□ 0.92
CPNE9-205ENST00000613455 ECHS1P30084 290 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 STIP1P31948 543 aaKnown RBP20.8■□□□□ 0.92
CPNE9-205ENST00000613455 GARSP41250 739 aaKnown RBP20.8■□□□□ 0.92
CPNE9-205ENST00000613455 VPS41P49754 854 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 DRG2P55039 364 aaKnown RBP20.8■□□□□ 0.92
CPNE9-205ENST00000613455 RPS24P62847 133 aaKnown RBP20.8■□□□□ 0.92
CPNE9-205ENST00000613455 ADGRE1Q14246 886 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 CBX2Q14781 532 aaPredicted RBP20.8■□□□□ 0.92
CPNE9-205ENST00000613455 GSPT2Q8IYD1 628 aaKnown RBP20.8■□□□□ 0.92
CPNE9-205ENST00000613455 UMODL1-AS1Q8N2C9 162 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 TTC16Q8NEE8 873 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 HDAC11Q96DB2 347 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 TDP1Q9NUW8 608 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 GRHL1Q9NZI5 618 aa20.8■□□□□ 0.92
CPNE9-205ENST00000613455 MX2P20592 715 aa20.79■□□□□ 0.92
CPNE9-205ENST00000613455 MCM3P25205 808 aa20.79■□□□□ 0.92
CPNE9-205ENST00000613455 PPIDQ08752 370 aaKnown RBP20.79■□□□□ 0.92
CPNE9-205ENST00000613455 RABGAP1LQ5R372 815 aa20.79■□□□□ 0.92
CPNE9-205ENST00000613455 FAM182AQ5T1J6 154 aa20.79■□□□□ 0.92
CPNE9-205ENST00000613455 FBXO38Q6PIJ6 1188 aa20.79■□□□□ 0.92
CPNE9-205ENST00000613455 CCNI2Q6ZMN8 369 aaPredicted RBP20.79■□□□□ 0.92
CPNE9-205ENST00000613455 BBS7Q8IWZ6 715 aa20.79■□□□□ 0.92
CPNE9-205ENST00000613455 CCDC89Q8N998 374 aa20.79■□□□□ 0.92
CPNE9-205ENST00000613455 DDX50Q9BQ39 737 aaKnown RBP20.79■□□□□ 0.92
CPNE9-205ENST00000613455 SLC39A8Q9C0K1 460 aa20.79■□□□□ 0.92
CPNE9-205ENST00000613455 CLEC1BQ9P126 229 aa20.79■□□□□ 0.92
CPNE9-205ENST00000613455 ZNF510Q9Y2H8 683 aa20.79■□□□□ 0.92
CPNE9-205ENST00000613455 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.78■□□□□ 0.92
CPNE9-205ENST00000613455 TBX10O75333 385 aa20.78■□□□□ 0.92
CPNE9-205ENST00000613455 USP4Q13107 963 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms