RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 MROH9Q5TGP6 573 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 LRRC8BQ6P9F7 803 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 RINLQ6ZS11 566 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 RTN4RL1Q86UN2 441 aaPredicted RBP15.08■□□□□ 0.01
CDH1-213ENST00000612417 SLC2A14Q8TDB8 520 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 SIKE1Q9BRV8 207 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 MAGEB5Q9BZ81 275 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 PAK6Q9NQU5 681 aaPredicted RBP15.08■□□□□ 0.01
CDH1-213ENST00000612417 PQBP1O60828 265 aaKnown RBP15.08■□□□□ 0
CDH1-213ENST00000612417 OPHN1O60890 802 aa15.08■□□□□ 0
CDH1-213ENST00000612417 LCP1P13796 627 aa15.08■□□□□ 0
CDH1-213ENST00000612417 AMPD1P23109 780 aa15.08■□□□□ 0
CDH1-213ENST00000612417 GRIK3Q13003 919 aa15.08■□□□□ 0
CDH1-213ENST00000612417 TBCCQ15814 346 aa15.08■□□□□ 0
CDH1-213ENST00000612417 KHDC1Q4VXA5 237 aaKnown RBP15.08■□□□□ 0
CDH1-213ENST00000612417 PAN2Q504Q3 1202 aaKnown RBP15.08■□□□□ 0
CDH1-213ENST00000612417 DENND5BQ6ZUT9 1274 aa15.08■□□□□ 0
CDH1-213ENST00000612417 SLC24A5Q71RS6 500 aa15.08■□□□□ 0
CDH1-213ENST00000612417 BNIPLQ7Z465 357 aa15.08■□□□□ 0
CDH1-213ENST00000612417 ALYREFQ86V81 257 aaKnown RBP15.08■□□□□ 0
CDH1-213ENST00000612417 CRLF3Q8IUI8 442 aa15.08■□□□□ 0
CDH1-213ENST00000612417 ARID3BQ8IVW6 561 aaPredicted RBP15.08■□□□□ 0
CDH1-213ENST00000612417 ARHGAP24Q8N264 748 aa15.08■□□□□ 0
CDH1-213ENST00000612417 B3GALNT2Q8NCR0 500 aa15.08■□□□□ 0
CDH1-213ENST00000612417 C3orf58Q8NDZ4 430 aa15.08■□□□□ 0
CDH1-213ENST00000612417 MCUR1Q96AQ8 359 aa15.08■□□□□ 0
CDH1-213ENST00000612417 NAT9Q9BTE0 207 aa15.08■□□□□ 0
CDH1-213ENST00000612417 SEZ6LQ9BYH1 1024 aa15.08■□□□□ 0
CDH1-213ENST00000612417 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.08■□□□□ 0
CDH1-213ENST00000612417 HBS1LQ9Y450 684 aaKnown RBP15.08■□□□□ 0
CDH1-213ENST00000612417 SDR42E2A6NKP2 422 aa15.07■□□□□ 0
CDH1-213ENST00000612417 XPO1O14980 1071 aaKnown RBP15.07■□□□□ 0
CDH1-213ENST00000612417 B3GAT3O94766 335 aa15.07■□□□□ 0
CDH1-213ENST00000612417 GLUD2P49448 558 aa15.07■□□□□ 0
CDH1-213ENST00000612417 ATN1P54259 1190 aaPredicted RBP15.07■□□□□ 0
CDH1-213ENST00000612417 WASHC5Q12768 1159 aa15.07■□□□□ 0
CDH1-213ENST00000612417 GLB1LQ6UWU2 654 aa15.07■□□□□ 0
CDH1-213ENST00000612417 ZNF598Q86UK7 904 aaKnown RBP15.07■□□□□ 0
CDH1-213ENST00000612417 FAM126BQ8IXS8 530 aa15.07■□□□□ 0
CDH1-213ENST00000612417 NT5C3BQ969T7 300 aa15.07■□□□□ 0
CDH1-213ENST00000612417 MED10Q9BTT4 135 aa15.07■□□□□ 0
CDH1-213ENST00000612417 THAP1Q9NVV9 213 aa15.07■□□□□ 0
CDH1-213ENST00000612417 DDX43Q9NXZ2 648 aaKnown RBP15.07■□□□□ 0
CDH1-213ENST00000612417 STOML1Q9UBI4 398 aa15.07■□□□□ 0
CDH1-213ENST00000612417 C9IYK1 514 aa15.07■□□□□ 0
CDH1-213ENST00000612417 MFSD11O43934 449 aa15.07■□□□□ 0
CDH1-213ENST00000612417 MAGEC1O60732 1142 aa15.07■□□□□ 0
CDH1-213ENST00000612417 DAB1O75553 588 aa15.07■□□□□ 0
CDH1-213ENST00000612417 STK10O94804 968 aaKnown RBP15.07■□□□□ 0
CDH1-213ENST00000612417 EOMESO95936 686 aa15.07■□□□□ 0
CDH1-213ENST00000612417 GSRP00390 522 aa15.07■□□□□ 0
CDH1-213ENST00000612417 PTPN1P18031 435 aaKnown RBP15.07■□□□□ 0
CDH1-213ENST00000612417 ATP6V1C1P21283 382 aa15.07■□□□□ 0
CDH1-213ENST00000612417 RAP1GDS1P52306 607 aa15.07■□□□□ 0
CDH1-213ENST00000612417 TUSC3Q13454 348 aa15.07■□□□□ 0
CDH1-213ENST00000612417 BLMHQ13867 455 aa15.07■□□□□ 0
CDH1-213ENST00000612417 ACSBG2Q5FVE4 666 aa15.07■□□□□ 0
CDH1-213ENST00000612417 TMEM86AQ8N2M4 240 aa15.07■□□□□ 0
CDH1-213ENST00000612417 TEX9Q8N6V9 391 aa15.07■□□□□ 0
CDH1-213ENST00000612417 HASPINQ8TF76 798 aa15.07■□□□□ 0
CDH1-213ENST00000612417 CDKL2Q92772 493 aa15.07■□□□□ 0
CDH1-213ENST00000612417 MFHAS1Q9Y4C4 1052 aa15.07■□□□□ 0
CDH1-213ENST00000612417 CCDC195A0A1B0GUA6 201 aa15.06■□□□□ 0
CDH1-213ENST00000612417 WDR27A2RRH5 827 aa15.06■□□□□ 0
CDH1-213ENST00000612417 H0Y3Z8 333 aa15.06■□□□□ 0
CDH1-213ENST00000612417 ZNF189O75820 626 aaPredicted RBP15.06■□□□□ 0
CDH1-213ENST00000612417 ALDOAP04075 364 aaKnown RBP15.06■□□□□ 0
CDH1-213ENST00000612417 FAM163BP0C2L3 166 aa15.06■□□□□ 0
CDH1-213ENST00000612417 ACADSP16219 412 aa15.06■□□□□ 0
CDH1-213ENST00000612417 PGAM1P18669 254 aa15.06■□□□□ 0
CDH1-213ENST00000612417 LHX1P48742 406 aa15.06■□□□□ 0
CDH1-213ENST00000612417 STX3Q13277 289 aa15.06■□□□□ 0
CDH1-213ENST00000612417 C11orf91Q3C1V1 193 aa15.06■□□□□ 0
CDH1-213ENST00000612417 TIGD5Q53EQ6 642 aa15.06■□□□□ 0
CDH1-213ENST00000612417 MDH1BQ5I0G3 518 aa15.06■□□□□ 0
CDH1-213ENST00000612417 OTUD1Q5VV17 481 aaPredicted RBP15.06■□□□□ 0
CDH1-213ENST00000612417 TMPRSS6Q8IU80 811 aa15.06■□□□□ 0
CDH1-213ENST00000612417 PYROXD2Q8N2H3 581 aa15.06■□□□□ 0
CDH1-213ENST00000612417 COLGALT1Q8NBJ5 622 aa15.06■□□□□ 0
CDH1-213ENST00000612417 ARNTL2Q8WYA1 636 aa15.06■□□□□ 0
CDH1-213ENST00000612417 LGMNQ99538 433 aa15.06■□□□□ 0
CDH1-213ENST00000612417 FERMT1Q9BQL6 677 aa15.06■□□□□ 0
CDH1-213ENST00000612417 FTHL17Q9BXU8 183 aa15.06■□□□□ 0
CDH1-213ENST00000612417 C20orf27Q9GZN8 174 aa15.06■□□□□ 0
CDH1-213ENST00000612417 STN1Q9H668 368 aaKnown RBP15.06■□□□□ 0
CDH1-213ENST00000612417 ARMCX1Q9P291 453 aa15.06■□□□□ 0
CDH1-213ENST00000612417 SORCS3Q9UPU3 1222 aa15.06■□□□□ 0
CDH1-213ENST00000612417 RNF103O00237 685 aa15.05■□□□□ 0
CDH1-213ENST00000612417 CLDN5O00501 218 aa15.05■□□□□ 0
CDH1-213ENST00000612417 GABRDO14764 452 aa15.05■□□□□ 0
CDH1-213ENST00000612417 GLRA3O75311 464 aa15.05■□□□□ 0
CDH1-213ENST00000612417 KPNB1Q14974 876 aaKnown RBP15.05■□□□□ 0
CDH1-213ENST00000612417 PACS1Q6VY07 963 aa15.05■□□□□ 0
CDH1-213ENST00000612417 FAM131BQ86XD5 332 aa15.05■□□□□ 0
CDH1-213ENST00000612417 TREML1Q86YW5 311 aa15.05■□□□□ 0
CDH1-213ENST00000612417 DEFB106AQ8N104 65 aa15.05■□□□□ 0
CDH1-213ENST00000612417 URGCPQ8TCY9 931 aa15.05■□□□□ 0
CDH1-213ENST00000612417 RNF139Q8WU17 664 aa15.05■□□□□ 0
CDH1-213ENST00000612417 LINC01599Q8WXQ3 324 aa15.05■□□□□ 0
CDH1-213ENST00000612417 HNRNPABQ99729 332 aaKnown RBP15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms