RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 PHF7Q9BWX1 381 aaPredicted RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 FRMD8P1Q9BZ68 369 aaPredicted RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 LINC00597Q9H2U6 94 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 ETNK2Q9NVF9 386 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 THG1LQ9NWX6 298 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 APOC4-APOC2K7ER74 178 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 CLDN11O75508 207 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 CNTN5O94779 1100 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 APOC2P02655 101 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 ALFQ53S48 1182 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 NCBP2-AS2Q69YL0 99 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 PARM1Q6UWI2 310 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 VITQ6UXI7 678 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 PLCD3Q8N3E9 789 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 HJURPQ8NCD3 748 aaPredicted RBP16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 DEPDC1BQ8WUY9 529 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 NXPE3Q969Y0 559 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 FAM83CQ9BQN1 747 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 KLC2Q9H0B6 622 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 HOMER3Q9NSC5 361 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 DUS2Q9NX74 493 aaKnown RBP16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 SMARCAL1Q9NZC9 954 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 MPP6Q9NZW5 540 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 MARK1Q9P0L2 795 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 RAD54BQ9Y620 910 aa16.43■□□□□ 0.22
CLTCL1-207ENST00000611723 A0A1B0GVM2 712 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 TCAF2A6NFQ2 919 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 PRR33A8MZF0 331 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 TRDMT1O14717 391 aaKnown RBP16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 SCAMP3O14828 347 aaKnown RBP16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 TSPAN3O60637 253 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 MAPKAPK2P49137 400 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 IRAK1P51617 712 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 SGSHP51688 502 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 RPS24P62847 133 aaKnown RBP16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 HTR4Q13639 388 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 PDGFRLQ15198 375 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 CYP1B1Q16678 543 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 EML3Q32P44 896 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 AFMIDQ63HM1 303 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 TMCO3Q6UWJ1 677 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 BZW1Q7L1Q6 419 aaKnown RBP16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 UMODL1-AS1Q8N2C9 162 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 FGF14Q92915 247 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 IRF7Q92985 503 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 PLA2G2FQ9BZM2 168 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 SPHK2Q9NRA0 654 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 FAM50BQ9Y247 325 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 NR2E1Q9Y466 385 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 WNT6Q9Y6F9 365 aa16.42■□□□□ 0.22
CLTCL1-207ENST00000611723 TYW5A2RUC4 315 aaKnown RBP16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 KRIT1O00522 736 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 TBL1XO60907 577 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 PENKP01210 267 aaPredicted RBP16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 CYBBP04839 570 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 PSMC3P17980 439 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 SERPINB6P35237 376 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 IFNAR2P48551 515 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 NDST2P52849 883 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 DYNLT1P63172 113 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 SLC10A2Q12908 348 aaPredicted RBP16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 CCNG2Q16589 344 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 FYB2Q5VWT5 728 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 PTCRAQ6ISU1 281 aaPredicted RBP16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 DRICH1Q6PGQ1 229 aaPredicted RBP16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 RHBDF2Q6PJF5 856 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 TMEM25Q86YD3 366 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 CFAP52Q8N1V2 620 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 CEP112Q8N8E3 955 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 PRELID2Q8N945 189 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 C12orf50Q8NA57 414 aaPredicted RBP16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 TTC16Q8NEE8 873 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 P3H4Q92791 437 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 P2RY11Q96G91 374 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 LRRC19Q9H756 370 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 TBC1D30Q9Y2I9 924 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 MFHAS1Q9Y4C4 1052 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 NUP205Q92621 2012 aa16.41■□□□□ 0.22
CLTCL1-207ENST00000611723 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 GOLGA6L10A0A0M3HER8 536 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 C2CD4DB7Z1M9 353 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 CCDC188H7C350 402 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 CHADO15335 359 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 HOXD9P28356 352 aaPredicted RBP16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 VCPP55072 806 aaKnown RBP16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 YBEYP58557 167 aaPredicted RBP16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 OTUD4Q01804 1114 aaKnown RBP16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 GBE1Q04446 702 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 ZNF177Q13360 481 aaPredicted RBP16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 XRCC4Q13426 336 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 NOMO1Q15155 1222 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 DHCR24Q15392 516 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 ADAT2Q7Z6V5 191 aaKnown RBP16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 SETD3Q86TU7 594 aaPredicted RBP16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 LRRC49Q8IUZ0 686 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 ARHGAP12Q8IWW6 846 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 NPWQ8N729 165 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 MNS1Q8NEH6 495 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 SPATA4Q8NEY3 305 aa16.4■□□□□ 0.22
CLTCL1-207ENST00000611723 ACTL9Q8TC94 416 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms