RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 FAM81BQ96LP2 452 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 SLC2A13Q96QE2 648 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 PRMT1Q99873 361 aaKnown RBP16.54■□□□□ 0.24
SGMS1-209ENST00000609445 SGK2Q9HBY8 427 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 TM7SF3Q9NS93 570 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 DDIT4Q9NX09 232 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 FBXL12Q9NXK8 326 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 KIAA1522Q9P206 1035 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-209ENST00000609445 PCOLCE2Q9UKZ9 415 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 MSRB2Q9Y3D2 182 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 CEP83Q9Y592 693 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 SNX11Q9Y5W9 270 aa16.54■□□□□ 0.24
SGMS1-209ENST00000609445 A0A1W2PP55 124 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 GTPBP10A4D1E9 387 aaKnown RBP16.53■□□□□ 0.24
SGMS1-209ENST00000609445 FAM47DPA6NHR8 397 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 KCNU1A8MYU2 1149 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 F5H5T6 163 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 KCNK3O14649 394 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 CBFA2T3O75081 653 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 MOCS3O95396 460 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 ERBB2P04626 1255 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 SRPRAP08240 638 aaKnown RBP16.53■□□□□ 0.24
SGMS1-209ENST00000609445 FTH1P19P0C7X4 201 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 MZF1P28698 734 aaPredicted RBP16.53■□□□□ 0.24
SGMS1-209ENST00000609445 AFF3P51826 1226 aaKnown RBP16.53■□□□□ 0.24
SGMS1-209ENST00000609445 CDK17Q00537 523 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 ECT2LQ008S8 904 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 CST6Q15828 149 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 ZNF423Q2M1K9 1284 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 OR6B2Q6IFH4 312 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 IL27RAQ6UWB1 636 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 FAM183BPQ6ZVS7 135 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 RAB44Q7Z6P3 723 aaPredicted RBP16.53■□□□□ 0.24
SGMS1-209ENST00000609445 MMAAQ8IVH4 418 aaKnown RBP16.53■□□□□ 0.24
SGMS1-209ENST00000609445 KDF1Q8NAX2 398 aaPredicted RBP16.53■□□□□ 0.24
SGMS1-209ENST00000609445 FAM129BQ96TA1 746 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 ORAI3Q9BRQ5 295 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 PLCB1Q9NQ66 1216 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.53■□□□□ 0.24
SGMS1-209ENST00000609445 RALYQ9UKM9 306 aaKnown RBP16.53■□□□□ 0.24
SGMS1-209ENST00000609445 PCDHGC3Q9UN70 934 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 NCKAP1Q9Y2A7 1128 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 ANKRD11Q6UB99 2663 aaPredicted RBP16.53■□□□□ 0.24
SGMS1-209ENST00000609445 SPEGQ15772 3267 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 PLXNB3Q9ULL4 1909 aa16.53■□□□□ 0.24
SGMS1-209ENST00000609445 ITIH6Q6UXX5 1313 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 PTPRBP23467 1997 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 EDDM13A0A1B0GTR0 161 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 FAM170AA1A519 330 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 FOXN3O00409 490 aaPredicted RBP16.52■□□□□ 0.24
SGMS1-209ENST00000609445 RNASEH1O60930 286 aaKnown RBP16.52■□□□□ 0.24
SGMS1-209ENST00000609445 TRIM16O95361 564 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 IGHV4-34P06331 123 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 VAV1P15498 845 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 PDGFRAP16234 1089 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 CLCN1P35523 988 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 GGCXP38435 758 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 PSMD8P48556 350 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 IRAK1P51617 712 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 GALCP54803 685 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 CENPCQ03188 943 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 ARID5BQ14865 1188 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 TPD52L1Q16890 204 aaPredicted RBP16.52■□□□□ 0.24
SGMS1-209ENST00000609445 PTPN20Q4JDL3 420 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 HSP90AA4PQ58FG1 418 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 KCNT1Q5JUK3 1230 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 RNF219Q5W0B1 726 aaPredicted RBP16.52■□□□□ 0.24
SGMS1-209ENST00000609445 KIAA0895LQ68EN5 471 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 FBXL22Q6P050 247 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 USP30Q70CQ3 517 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 SLC47A2Q86VL8 602 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 CCAR2Q8N163 923 aaKnown RBP16.52■□□□□ 0.24
SGMS1-209ENST00000609445 STK40Q8N2I9 435 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 MLKLQ8NB16 471 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 KDM1BQ8NB78 822 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 ZCCHC14Q8WYQ9 949 aaKnown RBP16.52■□□□□ 0.24
SGMS1-209ENST00000609445 RNF34Q969K3 372 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 NEUROG2Q9H2A3 272 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 ASNSD1Q9NWL6 643 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 SLC12A6Q9UHW9 1150 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 DNAJC12Q9UKB3 198 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 BTBD3Q9Y2F9 522 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 ANKRD6Q9Y2G4 727 aa16.52■□□□□ 0.24
SGMS1-209ENST00000609445 DOCK9Q9BZ29 2069 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 TARSL2A2RTX5 802 aaKnown RBP16.51■□□□□ 0.23
SGMS1-209ENST00000609445 HSF2BPO75031 334 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 RNASEH2AO75792 299 aaKnown RBP16.51■□□□□ 0.23
SGMS1-209ENST00000609445 GLI1P08151 1106 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 ZNF883P0CG24 379 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 ABCB4P21439 1286 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 CD27P26842 260 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 SLC8A1P32418 973 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 RDXP35241 583 aaKnown RBP16.51■□□□□ 0.23
SGMS1-209ENST00000609445 PTK2Q05397 1052 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 NME3Q13232 169 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 TEAD4Q15561 434 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 MAN2A1Q16706 1144 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 EFHC1Q5JVL4 640 aa16.51■□□□□ 0.23
SGMS1-209ENST00000609445 CXorf57Q6NSI4 855 aaKnown RBP16.51■□□□□ 0.23
SGMS1-209ENST00000609445 DPY19L2P1Q6NXN4 242 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms