RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TAC4Q86UU9 113 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 MMAAQ8IVH4 418 aaKnown RBP13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 APCDD1Q8J025 514 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 KDM1BQ8NB78 822 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 STK32AQ8WU08 396 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 ZNF606Q8WXB4 792 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 IGSF8Q969P0 613 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 FAM129BQ96TA1 746 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 OMDQ99983 421 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 INTS2Q9H0H0 1204 aaKnown RBP13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 CCDC86Q9H6F5 360 aaKnown RBP13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 EBF2Q9HAK2 575 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 SERGEFQ9UGK8 458 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 CYTH4Q9UIA0 394 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 DSPP15924 2871 aaKnown RBP13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 PTPRBP23467 1997 aa13.85□□□□□ -0.19
POLR2J3-219ENST00000608621 SPEGQ15772 3267 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 A0A1W2PPC4 97 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 THAP12O43422 761 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 MED7O43513 233 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 RNASEH2AO75792 299 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 DKK1O94907 266 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 TRUB2O95900 331 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 APOEP02649 317 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 HOXB3P14651 431 aaPredicted RBP13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 MARSP56192 900 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 C21orf59P57076 290 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 YWHAZP63104 245 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 RACK1P63244 317 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 PITX1P78337 314 aaPredicted RBP13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 ECT2LQ008S8 904 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 BECN1Q14457 450 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 PRAMEF14Q5SWL7 426 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 NCEH1Q6PIU2 408 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 TMEM110Q86TL2 294 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 CHSY1Q86X52 802 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 MDM1Q8TC05 714 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 RPL10LQ96L21 214 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 MED15Q96RN5 788 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 POPDC2Q9HBU9 364 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 ACP6Q9NPH0 428 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 TJP2Q9UDY2 1190 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 CEP83Q9Y592 693 aa13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 ANKRD11Q6UB99 2663 aaPredicted RBP13.84□□□□□ -0.19
POLR2J3-219ENST00000608621 GOLGA4Q13439 2230 aaKnown RBP13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 EDDM13A0A1B0GTR0 161 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 LRRC72A6NJI9 287 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 E5RJQ4 531 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 TNFSF14O43557 240 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 PCDHGA12O60330 932 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 GADD45BO75293 160 aaPredicted RBP13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 GRK6P43250 576 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 NUMBP49757 651 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 CCT8P50990 548 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 IL9RQ01113 521 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 PAK1Q13153 545 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 TAF5Q15542 800 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 MEA1Q16626 185 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 RNF219Q5W0B1 726 aaPredicted RBP13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 GJB7Q6PEY0 223 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 C19orf48Q6RUI8 117 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 MARCH9Q86YJ5 346 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 STK40Q8N2I9 435 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 ATP6V0D2Q8N8Y2 350 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 OR2T34Q8NGX1 318 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 PTPRN2Q92932 1015 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 BTN2A3PQ96KV6 586 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 SLC6A18Q96N87 628 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 TRIM62Q9BVG3 475 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 ACE2Q9BYF1 805 aaPredicted RBP13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 THAP9Q9H5L6 903 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 ADAMTS1Q9UHI8 967 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 SLC12A6Q9UHW9 1150 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 ITIH6Q6UXX5 1313 aa13.83□□□□□ -0.2
POLR2J3-219ENST00000608621 WDFY3Q8IZQ1 3526 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 A0A1B0GTQ1 180 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 KCNU1A8MYU2 1149 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 F5H5T6 163 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 VILLO15195 856 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 DFNA5O60443 496 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 IGLV3-25P01717 112 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 WNT1P04628 370 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 GOT1P17174 413 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 MZF1P28698 734 aaPredicted RBP13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 GNA15P30679 374 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 NNMTP40261 264 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 PSMD8P48556 350 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 STK19P49842 368 aaPredicted RBP13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 EIF4EBP2Q13542 120 aaPredicted RBP13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 KCNJ12Q14500 433 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 CCDC157Q569K6 752 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 SND1Q7KZF4 910 aaKnown RBP eCLIP13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 CREBRFQ8IUR6 639 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 DEFB106AQ8N104 65 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 CCAR2Q8N163 923 aaKnown RBP13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 WDTC1Q8N5D0 677 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 AADATQ8N5Z0 425 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 OR14C36Q8NHC7 312 aa13.82□□□□□ -0.2
POLR2J3-219ENST00000608621 SKA1Q96BD8 255 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms