RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 DPP8Q6V1X1 898 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 ATG14Q6ZNE5 492 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 C15orf52Q6ZUT6 534 aaKnown RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 ASCC1Q8N9N2 400 aaKnown RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 VCPIP1Q96JH7 1222 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 MARK4Q96L34 752 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 EMILIN2Q9BXX0 1053 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 SLC4A5Q9BY07 1137 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 RUBCNLQ9H714 662 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 SIRPGQ9P1W8 387 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 DNM3Q9UQ16 869 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 M0QX08 132 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 SNPHO15079 494 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 PSMC2P35998 433 aaKnown RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 MLLT3P42568 568 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 NAMPTP43490 491 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 TNNI2P48788 182 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 IDH3AP50213 366 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 CEACAM7Q14002 265 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 TCEAL1Q15170 157 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 DLG2Q15700 870 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 NFE2Q16621 373 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 TRIM71Q2Q1W2 868 aaKnown RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 PLEKHG7Q6ZR37 379 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 MAVSQ7Z434 540 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 GALNT6Q8NCL4 622 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 ATL1Q8WXF7 558 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 LENG8Q96PV6 779 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 NACC1Q96RE7 527 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 ZNF717Q9BY31 904 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 ANKRD60Q9BZ19 345 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 HOMER2Q9NSB8 354 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 PARVAQ9NVD7 372 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 MCM9Q9NXL9 1143 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 ATRNL1Q5VV63 1379 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 KAT6AQ92794 2004 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 LTBP1Q14766 1721 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 DUOX1Q9NRD9 1551 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 UTRNP46939 3433 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-218ENST00000608440 MEN1O00255 615 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 HAT1O14929 419 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 SLC16A3O15427 465 aaKnown RBP12.84□□□□□ -0.35
CTCFL-218ENST00000608440 ZBTB14O43829 449 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 USP12O75317 370 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 SNNO75324 88 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-218ENST00000608440 L1CAMP32004 1257 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 QARSP47897 775 aaKnown RBP12.84□□□□□ -0.35
CTCFL-218ENST00000608440 STX1BP61266 288 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 NPTX1Q15818 432 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 FSCBQ5H9T9 825 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 PXDC1Q5TGL8 231 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 ZCCHC8Q6NZY4 707 aaKnown RBP12.84□□□□□ -0.35
CTCFL-218ENST00000608440 BNC2Q6ZN30 1099 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-218ENST00000608440 GLRX5Q86SX6 157 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 PEX13Q92968 403 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 CLSTN3Q9BQT9 956 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 REEP2Q9BRK0 252 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 NOL11Q9H8H0 719 aaKnown RBP12.84□□□□□ -0.35
CTCFL-218ENST00000608440 HMG20AQ9NP66 347 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 KCNN3Q9UGI6 736 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 HMGXB4Q9UGU5 601 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 ARHGEF35A5YM69 484 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 FAM172BPA6NC97 362 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 USP17L3A6NCW0 530 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 USP17L4A6NCW7 530 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 LIASO43766 372 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 B4GALT4O60513 344 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 TSPAN1O60635 241 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 NADKO95544 446 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-218ENST00000608440 S100A5P33763 92 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 PTPN9P43378 593 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 PSMC6P62333 389 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 CLEC16AQ2KHT3 1053 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 ATP13A4Q4VNC1 1196 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 ZBTB49Q6ZSB9 765 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 USP17L1Q7RTZ2 530 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 SLC51BQ86UW2 128 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 BRSK2Q8IWQ3 736 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 DSELQ8IZU8 1212 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 LSMEM2Q8N112 164 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 ZFP90Q8TF47 636 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 PPWD1Q96BP3 646 aaKnown RBP12.84□□□□□ -0.35
CTCFL-218ENST00000608440 PGBD4Q96DM1 585 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 OMA1Q96E52 524 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 RAD21L1Q9H4I0 556 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 ATP13A3Q9H7F0 1226 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 KIF13BQ9NQT8 1826 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 PCM1Q15154 2024 aa12.84□□□□□ -0.35
CTCFL-218ENST00000608440 EDIL3O43854 480 aa12.83□□□□□ -0.35
CTCFL-218ENST00000608440 SLITRK3O94933 977 aa12.83□□□□□ -0.35
CTCFL-218ENST00000608440 WEE2P0C1S8 567 aa12.83□□□□□ -0.35
CTCFL-218ENST00000608440 MRPS15P82914 257 aaKnown RBP12.83□□□□□ -0.35
CTCFL-218ENST00000608440 GALK2Q01415 458 aa12.83□□□□□ -0.35
CTCFL-218ENST00000608440 SPCS2Q15005 226 aa12.83□□□□□ -0.35
CTCFL-218ENST00000608440 ZNF354CQ86Y25 554 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms