RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 RASAL2Q9UJF2 1139 aa3.56□□□□□ -1.84
ZEB1-224ENST00000606161 SLC45A2Q9UMX9 530 aa3.56□□□□□ -1.84
ZEB1-224ENST00000606161 TBC1D30Q9Y2I9 924 aa3.56□□□□□ -1.84
ZEB1-224ENST00000606161 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.56□□□□□ -1.84
ZEB1-224ENST00000606161 ENTPD2Q9Y5L3 495 aa3.56□□□□□ -1.84
ZEB1-224ENST00000606161 EHBP1L1Q8N3D4 1523 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 UGGT2Q9NYU1 1516 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 ZNF608Q9ULD9 1512 aaPredicted RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 LRRC3CA6NJW4 275 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 KIF28PB7ZC32 967 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 PSMD9O00233 223 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 PSMA7O14818 248 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 VILLO15195 856 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 SGPL1O95470 568 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 CER1O95813 267 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 CLEC3BP05452 202 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 LAMP2P13473 410 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 MSH2P43246 934 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 GCLCP48506 637 aaPredicted RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 RARRES1P49788 294 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 CDH15P55291 814 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 LILRA4P59901 499 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 RPS3AP61247 264 aaKnown RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 PRAMEP78395 509 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 NEXNQ0ZGT2 675 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 FOXF2Q12947 444 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 STK4Q13043 487 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 DCTN2Q13561 401 aaKnown RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 ACVR2BQ13705 512 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 TBCEQ15813 527 aaPredicted RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 PREPLQ4J6C6 727 aaPredicted RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 CBWD5Q5RIA9 395 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 DEPDC1Q5TB30 811 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 SNX30Q5VWJ9 437 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 PAPD7Q5XG87 772 aaKnown RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 SP5Q6BEB4 398 aaPredicted RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 ABLIM2Q6H8Q1 611 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 TMEM154Q6P9G4 183 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 IKBIPQ70UQ0 350 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 CCDC91Q7Z6B0 441 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 ADGRG6Q86SQ4 1221 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 IQCA1Q86XH1 822 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 RAB11FIP4Q86YS3 637 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 PDPRQ8NCN5 879 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 TMIEQ8NEW7 156 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 OR1N1Q8NGS0 311 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 SCFD2Q8WU76 684 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 FAM120BQ96EK7 910 aaKnown RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 KTI12Q96EK9 354 aaPredicted RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 BOD1Q96IK1 185 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 PDLIM2Q96JY6 352 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 FAR2Q96K12 515 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 NAP1L5Q96NT1 182 aaPredicted RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 PNKPQ96T60 521 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 NCAPGQ9BPX3 1015 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 PTDSS2Q9BVG9 487 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 TRIM5Q9C035 493 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 RANBP17Q9H2T7 1088 aaKnown RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 ARHGEF3Q9NR81 526 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 PLSCR4Q9NRQ2 329 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 DNMT3BQ9UBC3 853 aaKnown RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 MORF4L1Q9UBU8 362 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 NKX1-2Q9UD57 310 aaPredicted RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 TESQ9UGI8 421 aaKnown RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 CHORDC1Q9UHD1 332 aaPredicted RBP3.55□□□□□ -1.84
ZEB1-224ENST00000606161 KCNE5Q9UJ90 142 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 HSF4Q9ULV5 492 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 AGAP1Q9UPQ3 857 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 CDYLQ9Y232 598 aa3.55□□□□□ -1.84
ZEB1-224ENST00000606161 SETD5Q9C0A6 1442 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.54□□□□□ -1.84
ZEB1-224ENST00000606161 CCDC195A0A1B0GUA6 201 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 FAM90A18PA6NE21 464 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 FAM90A16PA6NEW6 464 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 FAM90A9PA6NNJ1 464 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 FAM90A5PA8MXJ8 464 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 MYO1GB0I1T2 1018 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 H3BNC9 293 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 CD3EAPO15446 510 aaKnown RBP3.54□□□□□ -1.84
ZEB1-224ENST00000606161 TRIAP1O43715 76 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 ERN1O75460 977 aaKnown RBP3.54□□□□□ -1.84
ZEB1-224ENST00000606161 TAF5LO75529 589 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 RPP40O75818 363 aaKnown RBP3.54□□□□□ -1.84
ZEB1-224ENST00000606161 F9P00740 461 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 HNRNPCP07910 306 aaKnown RBP eCLIP3.54□□□□□ -1.845e-6■□□□□ 10.6
ZEB1-224ENST00000606161 FAM90A15PP0C7V4 464 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 FAM90A14PP0C7W9 464 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 MMP8P22894 467 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 RBL1P28749 1068 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 CTCFP49711 727 aaPredicted RBP3.54□□□□□ -1.84
ZEB1-224ENST00000606161 DGKQP52824 942 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 ELLP55199 621 aaPredicted RBP3.54□□□□□ -1.84
ZEB1-224ENST00000606161 EIF3BP55884 814 aaKnown RBP3.54□□□□□ -1.84
ZEB1-224ENST00000606161 PROK1P58294 105 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 RBM6P78332 1123 aaKnown RBP3.54□□□□□ -1.84
ZEB1-224ENST00000606161 KRT83P78385 493 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 ZBED6P86452 979 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 NHLH1Q02575 133 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 SLFN5Q08AF3 891 aa3.54□□□□□ -1.84
ZEB1-224ENST00000606161 TCF15Q12870 199 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms