RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 BNC1Q01954 994 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 RPL6Q02878 288 aaKnown RBP11.01□□□□□ -0.65
TUBE1-210ENST00000604967 PUM1Q14671 1186 aaKnown RBP eCLIP11.01□□□□□ -0.65
TUBE1-210ENST00000604967 KLHL40Q2TBA0 621 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 HNRNPA1L2Q32P51 320 aaKnown RBP11.01□□□□□ -0.65
TUBE1-210ENST00000604967 SLC25A52Q3SY17 297 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 FNDC3BQ53EP0 1204 aaKnown RBP11.01□□□□□ -0.65
TUBE1-210ENST00000604967 C9orf64Q5T6V5 341 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 STPG1Q5TH74 334 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 FAM72AQ5TYM5 149 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 SDE2Q6IQ49 451 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 FAM72DQ6L9T8 149 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 MON1BQ7L1V2 547 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 LPCAT2Q7L5N7 544 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 CYP2U1Q7Z449 544 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 METTL3Q86U44 580 aaKnown RBP11.01□□□□□ -0.65
TUBE1-210ENST00000604967 LUZP1Q86V48 1076 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 FAM72BQ86X60 149 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 FAM131BQ86XD5 332 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 ZNF677Q86XU0 584 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 NEK11Q8NG66 645 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 OR2T3Q8NH03 318 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 C1orf216Q8TAB5 229 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 NETO1Q8TDF5 533 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 FRS2Q8WU20 508 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 VOPP1Q96AW1 172 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 TOE1Q96GM8 510 aaKnown RBP11.01□□□□□ -0.65
TUBE1-210ENST00000604967 ZNF419Q96HQ0 510 aaPredicted RBP11.01□□□□□ -0.65
TUBE1-210ENST00000604967 HSPA12BQ96MM6 686 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 NOX5Q96PH1 765 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 FAM129BQ96TA1 746 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 ORAI3Q9BRQ5 295 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 TRIM62Q9BVG3 475 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 SIK2Q9H0K1 926 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 SYNCQ9H7C4 482 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 VPS45Q9NRW7 570 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 MPP6Q9NZW5 540 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 ERVW-1Q9UQF0 538 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 CEP192Q8TEP8 1941 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 SPEGQ15772 3267 aa11.01□□□□□ -0.65
TUBE1-210ENST00000604967 IGLV3-10A0A075B6K4 115 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 A0A0D9SEW6 157 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 DRGXA6NNA5 263 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 F5H5T6 163 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 NPC1O15118 1278 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 MAP3K13O43283 966 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 SNAP91O60641 907 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 MT-CO1P00395 513 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 POLR2EP19388 210 aaKnown RBP11□□□□□ -0.65
TUBE1-210ENST00000604967 CDK11BP21127 795 aaKnown RBP11□□□□□ -0.65
TUBE1-210ENST00000604967 GLDCP23378 1020 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 CD6P30203 668 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 ACSL1P33121 698 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 RFC1P35251 1148 aaPredicted RBP11□□□□□ -0.65
TUBE1-210ENST00000604967 PBX1P40424 430 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 PLK1P53350 603 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 HDAC4P56524 1084 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 ATP11AP98196 1134 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 OGDHQ02218 1023 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 DEUP1Q05D60 604 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 ZNF33AQ06730 810 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 CDH18Q13634 790 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 ARID5BQ14865 1188 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 NR1I3Q14994 352 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 PPP1R15BQ5SWA1 713 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 MANEALQ5VSG8 457 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 LYSMD4Q5XG99 296 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 DGLUCYQ7Z3D6 616 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 FAM124AQ86V42 546 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 PHF13Q86YI8 300 aaPredicted RBP11□□□□□ -0.65
TUBE1-210ENST00000604967 ZDHHC17Q8IUH5 632 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 SYT12Q8IV01 421 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 CCDC185Q8N715 623 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 ATP6V0D2Q8N8Y2 350 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 UCMAQ8WVF2 138 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 RXFP2Q8WXD0 754 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 CENPIQ92674 756 aaPredicted RBP11□□□□□ -0.65
TUBE1-210ENST00000604967 PTPRN2Q92932 1015 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 SIPA1Q96FS4 1042 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 SPACA7Q96KW9 195 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 SPAG5Q96R06 1193 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 AGPAT1Q99943 283 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 DDX50Q9BQ39 737 aaKnown RBP11□□□□□ -0.65
TUBE1-210ENST00000604967 FEM1AQ9BSK4 669 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 GPR174Q9BXC1 333 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 PDCL3Q9H2J4 239 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 CAPN10Q9HC96 672 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 NDFIP2Q9NV92 336 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 CDV3Q9UKY7 258 aaKnown RBP11□□□□□ -0.65
TUBE1-210ENST00000604967 TBC1D30Q9Y2I9 924 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 ITIH6Q6UXX5 1313 aa11□□□□□ -0.65
TUBE1-210ENST00000604967 ADAMTS9Q9P2N4 1935 aa10.99□□□□□ -0.65
TUBE1-210ENST00000604967 A0A1B0GVM2 712 aa10.99□□□□□ -0.65
TUBE1-210ENST00000604967 TCAF2A6NFQ2 919 aa10.99□□□□□ -0.65
TUBE1-210ENST00000604967 LRRC53A6NM62 1247 aa10.99□□□□□ -0.65
TUBE1-210ENST00000604967 H0Y626 953 aa10.99□□□□□ -0.65
TUBE1-210ENST00000604967 K7ERQ8 282 aa10.99□□□□□ -0.65
TUBE1-210ENST00000604967 GIPC1O14908 333 aa10.99□□□□□ -0.65
TUBE1-210ENST00000604967 SYNCRIPO60506 623 aaKnown RBP10.99□□□□□ -0.65
TUBE1-210ENST00000604967 ABCB4P21439 1286 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms