RNA–Protein interactions for RNA: ENST00000604754.1

ZSWIM8-222, Transcript of zinc finger SWIM-type containing 8, human

TSL 1 (best)

Gene ZSWIM8, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-222	ENST00000604754	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ABCC13	Q9NSE7	274 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ABCF3	Q9NUQ8	709 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	BFAR	Q9NZS9	450 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	MARCH2	Q9P0N8	246 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	BCLAF3	A2AJT9	711 aa	Known RBP	11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	DNAJC6	O75061	913 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	BGN	P21810	368 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	DRD4	P21917	467 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	GCA	P28676	217 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	NR2C2	P49116	596 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	VSIG1	Q86XK7	387 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	CAB39L	Q9H9S4	337 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SP110	Q9HB58	689 aa		11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	CPSF2	Q9P2I0	782 aa	Known RBP	11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	G3BP2	Q9UN86	482 aa	Known RBP	11.64	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SDR42E2	A6NKP2	422 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	CHAD	O15335	359 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SERPINB6	P35237	376 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	GLRB	P48167	497 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	PLD1	Q13393	1074 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	NFE2	Q16621	373 aa	Predicted RBP	11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	TRIM71	Q2Q1W2	868 aa	Known RBP	11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	PPM1J	Q5JR12	505 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	CMC1	Q7Z7K0	106 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	MICAL1	Q8TDZ2	1067 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	KCTD13	Q8WZ19	329 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	CENPI	Q92674	756 aa	Predicted RBP	11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ZNF778	Q96MU6	729 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	CYP2S1	Q96SQ9	504 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	AGAP2	Q99490	1192 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ACSS3	Q9H6R3	686 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	PLK2	Q9NYY3	685 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	KLHL14	Q9P2G3	628 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ACTL7A	Q9Y615	435 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	TLR5	O60602	858 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	PTPN3	P26045	913 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	TYK2	P29597	1187 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SPRED3	Q2MJR0	410 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	TCTN1	Q2MV58	587 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	CD300LG	Q6UXG3	332 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SCD5	Q86SK9	330 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ERLEC1	Q96DZ1	483 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	MOCOS	Q96EN8	888 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	TMEM169	Q96HH4	297 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	FICD	Q9BVA6	458 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	TMEM161A	Q9NX61	479 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	KANSL3	Q9P2N6	904 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	PSAT1	Q9Y617	370 aa		11.63	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ARHGEF37	A1IGU5	675 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	CCNB1	P14635	433 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ELF1	P32519	619 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	WASHC5	Q12768	1159 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	BTG3	Q14201	252 aa	Predicted RBP	11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	LGSN	Q5TDP6	509 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ZNF598	Q86UK7	904 aa	Known RBP	11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	OR6P1	Q8NGX9	317 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	CDKL2	Q92772	493 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SLC39A8	Q9C0K1	460 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	IARS2	Q9NSE4	1012 aa	Known RBP	11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	FIS1	Q9Y3D6	152 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	PRUNE2	Q8WUY3	3088 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	HHLA1	C9JL84	531 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SUN1	O94901	812 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	EOMES	O95936	686 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	GJA1	P17302	382 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	OR1E1	P30953	314 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	GSC	P56915	257 aa	Predicted RBP	11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	MFSD5	Q6N075	450 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SGF29	Q96ES7	293 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	EBNA1BP2	Q99848	306 aa	Known RBP	11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	FOXP3	Q9BZS1	431 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ZNF358	Q9NW07	568 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	PHTF1	Q9UMS5	762 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	PCDHB8	Q9UN66	801 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	TEX264	Q9Y6I9	313 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	7e-6	■■■■■ 60.3
ZSWIM8-222	ENST00000604754	GJB3	O75712	270 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	MX2	P20592	715 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	IRF5	Q13568	498 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	PRPSAP1	Q14558	356 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	ALF	Q53S48	1182 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SPATA21	Q7Z572	469 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SLC26A11	Q86WA9	606 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	DENND1C	Q8IV53	801 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	PAWR	Q96IZ0	340 aa	Known RBP	11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	SLC2A13	Q96QE2	648 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	YME1L1	Q96TA2	773 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	TTPAL	Q9BTX7	342 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	CHD7	Q9P2D1	2997 aa		11.62	□□□□□ -0.55
ZSWIM8-222	ENST00000604754		E9PAM4	449 aa		11.61	□□□□□ -0.55
ZSWIM8-222	ENST00000604754		J3KR12	359 aa		11.61	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	IRAK2	O43187	625 aa		11.61	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	KRT38	O76015	456 aa		11.61	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	GALT	P07902	379 aa		11.61	□□□□□ -0.55
ZSWIM8-222	ENST00000604754	KCNA4	P22459	653 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms