RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 HES6Q96HZ4 224 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 LMLNQ96KR4 655 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 XPO6Q96QU8 1125 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 CALN1Q9BXU9 219 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 ARHGEF3Q9NR81 526 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 WNT16Q9UBV4 365 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 MFHAS1Q9Y4C4 1052 aa20.6■□□□□ 0.89
SHKBP1-222ENST00000600320 MIA3Q5JRA6 1907 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 CCDC66A2RUB6 948 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 ERCC2P18074 760 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 HTR7P34969 479 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 ARL4AP40617 200 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 HCAR3P49019 387 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 ZNF135P52742 658 aaPredicted RBP20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 KDSRQ06136 332 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 LMAN2Q12907 356 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 MFSD7Q6UXD7 560 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 RTL3Q8N8U3 475 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 FIBINQ8TAL6 211 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 FAF2Q96CS3 445 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 ARHGEF4Q9NR80 690 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 TMEM248Q9NWD8 314 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 FBXL21Q9UKT6 434 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 KIAA1549LQ6ZVL6 1849 aa20.59■□□□□ 0.89
SHKBP1-222ENST00000600320 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 WASH4PA8MWX3 477 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 MIF4GDA9UHW6 222 aaKnown RBP20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 H0Y626 953 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 KIF5CO60282 957 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 CLDN11O75508 207 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 GLULP15104 373 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 CD72P21854 359 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 HLA-FP30511 346 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 CD70P32970 193 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 GALK1P51570 392 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 ZNF177Q13360 481 aaPredicted RBP20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 CDH18Q13634 790 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 DCAF12L1Q5VU92 463 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 GRAMD4Q6IC98 578 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 AADACL2Q6P093 401 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 SFTPA1Q8IWL2 248 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 PCDH19Q8TAB3 1148 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 ZNF670Q9BS34 389 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 TLR10Q9BXR5 811 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 SLC2A11Q9BYW1 496 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 CATSPERBQ9H7T0 1116 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 ETNK2Q9NVF9 386 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 RCOR3Q9P2K3 495 aaPredicted RBP20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 DNAI1Q9UI46 699 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 TBC1D30Q9Y2I9 924 aa20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.58■□□□□ 0.89
SHKBP1-222ENST00000600320 DCLK1O15075 740 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 FGF10O15520 208 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 DAPK3O43293 454 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 DCXO43602 365 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 EIF2DP41214 584 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 CSKP41240 450 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 DGKGP49619 791 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 RWDD2BP57060 319 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 PON2Q15165 354 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 LLGL1Q15334 1064 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 TAZQ16635 292 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 GEN1Q17RS7 908 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 ANKRD20A8PQ5CZ79 823 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 SPOCD1Q6ZMY3 1216 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 MAP7D3Q8IWC1 876 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 SIX5Q8N196 739 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 PQLC3Q8N755 202 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 NETO2Q8NC67 525 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 EXD1Q8NHP7 514 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 FAM3CQ92520 227 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 EZH1Q92800 747 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 MSANTD3Q96H12 275 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 PNKPQ96T60 521 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 P2RY13Q9BPV8 354 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 KLC2Q9H0B6 622 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 NOL6Q9H6R4 1146 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 ABCB8Q9NUT2 735 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 DEC1Q9P2X7 70 aa20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 INTS6Q9UL03 887 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-222ENST00000600320 ANTXRLA6NF34 631 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 ZRANB2O95218 330 aaKnown RBP eCLIP20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 RHOCP08134 193 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 PYGMP11217 842 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 PABPC1P11940 636 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 MZF1P28698 734 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 OR1E1P30953 314 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 CDKN2BP42772 138 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 MAPKAPK2P49137 400 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 NUMBP49757 651 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 AMPD2Q01433 879 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 PRKCQQ04759 706 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 ZNF211Q13398 564 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 RPS6KA1Q15418 735 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 FSTL4Q6MZW2 842 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 KIAA0907Q7Z7F0 614 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 RCOR2Q8IZ40 523 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 NPWQ8N729 165 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 UBL4BQ8N7F7 174 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms