RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SCAMP3O14828 347 aaKnown RBP23.99■■□□□ 1.43
SYMPK-212ENST00000598896 XYLBO75191 536 aa23.99■■□□□ 1.43
SYMPK-212ENST00000598896 CKMP06732 381 aa23.99■■□□□ 1.43
SYMPK-212ENST00000598896 KCNC3Q14003 757 aa23.99■■□□□ 1.43
SYMPK-212ENST00000598896 ACBD5Q5T8D3 534 aaPredicted RBP23.99■■□□□ 1.43
SYMPK-212ENST00000598896 EMBQ6PCB8 327 aa23.99■■□□□ 1.43
SYMPK-212ENST00000598896 TFAP2DQ7Z6R9 452 aa23.99■■□□□ 1.43
SYMPK-212ENST00000598896 ZNF212Q9UDV6 495 aa23.99■■□□□ 1.43
SYMPK-212ENST00000598896 DPP7Q9UHL4 492 aa23.99■■□□□ 1.43
SYMPK-212ENST00000598896 DRGXA6NNA5 263 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 PPP1R12AO14974 1030 aaPredicted RBP23.98■■□□□ 1.43
SYMPK-212ENST00000598896 RHOQP17081 205 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 ITIH2P19823 946 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 ITGA8P53708 1063 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 SLC7A9P82251 487 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 AP1B1Q10567 949 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 CALCOCO2Q13137 446 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 IZUMO3Q5VZ72 239 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 HEATR6Q6AI08 1181 aaKnown RBP23.98■■□□□ 1.43
SYMPK-212ENST00000598896 GRASPQ7Z6J2 395 aaPredicted RBP23.98■■□□□ 1.43
SYMPK-212ENST00000598896 LGI2Q8N0V4 545 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 C12orf76Q8N812 135 aaPredicted RBP23.98■■□□□ 1.43
SYMPK-212ENST00000598896 CCNYQ8ND76 341 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 DEPDC1BQ8WUY9 529 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.98■■□□□ 1.43
SYMPK-212ENST00000598896 AZIN2Q96A70 460 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 PRICKLE1Q96MT3 831 aaPredicted RBP23.98■■□□□ 1.43
SYMPK-212ENST00000598896 CLUHO75153 1309 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 F5H5T6 163 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 GARSP41250 739 aaKnown RBP23.98■■□□□ 1.43
SYMPK-212ENST00000598896 TEAD2Q15562 447 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 PRSS36Q5K4E3 855 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 TAB3Q8N5C8 712 aaPredicted RBP23.98■■□□□ 1.43
SYMPK-212ENST00000598896 HTR3CQ8WXA8 447 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 CAVIN3Q969G5 261 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 HDAC11Q96DB2 347 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 P2RY11Q96G91 374 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 FMO2Q99518 471 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 NOL6Q9H6R4 1146 aaKnown RBP23.98■■□□□ 1.43
SYMPK-212ENST00000598896 TMEM248Q9NWD8 314 aa23.98■■□□□ 1.43
SYMPK-212ENST00000598896 NYNRINQ9P2P1 1898 aaKnown RBP23.98■■□□□ 1.43
SYMPK-212ENST00000598896 HELZP42694 1942 aaKnown RBP23.97■■□□□ 1.43
SYMPK-212ENST00000598896 MYO9BQ13459 2157 aa23.97■■□□□ 1.43
SYMPK-212ENST00000598896 TRAV19A0A0A6YYK7 116 aa23.97■■□□□ 1.43
SYMPK-212ENST00000598896 SPDYE4A6NLX3 237 aa23.97■■□□□ 1.43
SYMPK-212ENST00000598896 PPIDQ08752 370 aaKnown RBP23.97■■□□□ 1.43
SYMPK-212ENST00000598896 C5orf22Q49AR2 442 aa23.97■■□□□ 1.43
SYMPK-212ENST00000598896 AFMIDQ63HM1 303 aa23.97■■□□□ 1.43
SYMPK-212ENST00000598896 RHBDF2Q6PJF5 856 aa23.97■■□□□ 1.43
SYMPK-212ENST00000598896 CFAP52Q8N1V2 620 aa23.97■■□□□ 1.43
SYMPK-212ENST00000598896 CCDC110Q8TBZ0 833 aa23.97■■□□□ 1.43
SYMPK-212ENST00000598896 MRPL38Q96DV4 380 aaKnown RBP23.97■■□□□ 1.43
SYMPK-212ENST00000598896 SLC39A8Q9C0K1 460 aa23.97■■□□□ 1.43
SYMPK-212ENST00000598896 SMG9Q9H0W8 520 aaKnown RBP23.97■■□□□ 1.43
SYMPK-212ENST00000598896 PRO3102Q9H379 93 aa23.97■■□□□ 1.43
SYMPK-212ENST00000598896 SHROOM3Q8TF72 1996 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 DNALI1O14645 258 aaPredicted RBP23.96■■□□□ 1.43
SYMPK-212ENST00000598896 TRDMT1O14717 391 aaKnown RBP23.96■■□□□ 1.43
SYMPK-212ENST00000598896 NCAM2O15394 837 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 POU2F2P09086 479 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 SGSHP51688 502 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 ADGRF1Q5T601 910 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 GPR158Q5T848 1215 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 CHRDL2Q6WN34 429 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 LZTR1Q8N653 840 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 STOML2Q9UJZ1 356 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 FGF19O95750 216 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 MX2P20592 715 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 HIBCHQ6NVY1 386 aaPredicted RBP23.96■■□□□ 1.43
SYMPK-212ENST00000598896 Q6ZNB5 142 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 ARHGAP36Q6ZRI8 547 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 TTC16Q8NEE8 873 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 PDE4DIPQ5VU43 2346 aa23.96■■□□□ 1.43
SYMPK-212ENST00000598896 DFFAO00273 331 aa23.95■■□□□ 1.42
SYMPK-212ENST00000598896 TNNT3P45378 269 aaPredicted RBP23.95■■□□□ 1.42
SYMPK-212ENST00000598896 RPS24P62847 133 aaKnown RBP23.95■■□□□ 1.42
SYMPK-212ENST00000598896 RNASEH2BQ5TBB1 312 aaKnown RBP23.95■■□□□ 1.42
SYMPK-212ENST00000598896 POTEHQ6S545 545 aa23.95■■□□□ 1.42
SYMPK-212ENST00000598896 TMC5Q6UXY8 1006 aa23.95■■□□□ 1.42
SYMPK-212ENST00000598896 LEMD2Q8NC56 503 aa23.95■■□□□ 1.42
SYMPK-212ENST00000598896 FUT8Q9BYC5 575 aa23.95■■□□□ 1.42
SYMPK-212ENST00000598896 CEP41Q9BYV8 373 aa23.95■■□□□ 1.42
SYMPK-212ENST00000598896 ANAPC5Q9UJX4 755 aa23.95■■□□□ 1.42
SYMPK-212ENST00000598896 TPX2Q9ULW0 747 aaKnown RBP23.95■■□□□ 1.42
SYMPK-212ENST00000598896 ZFP37Q9Y6Q3 630 aaPredicted RBP23.95■■□□□ 1.42
SYMPK-212ENST00000598896 C2orf16Q68DN1 1984 aa23.95■■□□□ 1.42
SYMPK-212ENST00000598896 C5orf60A6NFR6 353 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 KCNK1O00180 336 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 RNF103O00237 685 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 GCATO75600 419 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 PFKLP17858 780 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 WASHC5Q12768 1159 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 UMODL1-AS1Q8N2C9 162 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 LRRC45Q96CN5 670 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 CFAP97Q9P2B7 532 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 CCL26Q9Y258 94 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 FARP1Q9Y4F1 1045 aaPredicted RBP23.94■■□□□ 1.42
SYMPK-212ENST00000598896 SASH3O75995 380 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 ELMSAN1Q6PJG2 1045 aa23.94■■□□□ 1.42
SYMPK-212ENST00000598896 CMTM8Q8IZV2 173 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms