RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SLC44A1Q8WWI5 657 aa17.49■□□□□ 0.39
SHKBP1-216ENST00000598201 EIF2B3Q9NR50 452 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-216ENST00000598201 KLHL8Q9P2G9 620 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-216ENST00000598201 PLXNA3P51805 1871 aa17.49■□□□□ 0.39
SHKBP1-216ENST00000598201 FNDC1Q4ZHG4 1894 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-216ENST00000598201 FAM92AA1XBS5 289 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 FAM47DPA6NHR8 397 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 MX2P20592 715 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 CD68P34810 354 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 SERPINB6P35237 376 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 WDR4P57081 412 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 CRADDP78560 199 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 CDK16Q00536 496 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 OLIG2Q13516 323 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 SPARCL1Q14515 664 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 MGAT5BQ3V5L5 792 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 TMEM240Q5SV17 173 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 MSANTD2Q6P1R3 559 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 PSRC1Q6PGN9 363 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 CPLX4Q7Z7G2 160 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 C14orf80Q86SX3 495 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 TAX1BP1Q86VP1 789 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 SEPT5Q99719 369 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 TTPALQ9BTX7 342 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 SMYD2Q9NRG4 433 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 PDE4DIPQ5VU43 2346 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 ABHD14A-ACY1A0A1B0GW23 586 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 ZBTB24O43167 697 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 ADAM12O43184 909 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 FAM155BO75949 473 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 TBX18O95935 607 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 APOEP02649 317 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 YWHAQP27348 245 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 HOXC13P31276 330 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 STX2P32856 288 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 LRRC8BQ6P9F7 803 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 TRMT10BQ6PF06 316 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 ARHGAP36Q6ZRI8 547 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 ARHGAP12Q8IWW6 846 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 LRRC43Q8N309 656 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 ZSCAN18Q8TBC5 510 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 DENND1AQ8TEH3 1009 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 CKAP2Q8WWK9 683 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 SLC39A13Q96H72 371 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 SERPINB11Q96P15 392 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 AGAP3Q96P47 875 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 SMC6Q96SB8 1091 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 GDF15Q99988 308 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 BRD8Q9H0E9 1235 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 NDFIP2Q9NV92 336 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 NKIRAS1Q9NYS0 192 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 SENP1Q9P0U3 644 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 HS3ST4Q9Y661 456 aa17.48■□□□□ 0.39
SHKBP1-216ENST00000598201 PRPF4O43172 522 aaKnown RBP eCLIP17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 TYROBPO43914 113 aa17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 MLNP12872 115 aa17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 KRT4P19013 534 aa17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 PRKCHP24723 683 aa17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 SARNPP82979 210 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 ELAVL2Q12926 359 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 DUSP4Q13115 394 aa17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 RASIP1Q5U651 963 aa17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 FBXO32Q969P5 355 aa17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 VN1R3Q9BXE9 311 aa17.47■□□□□ 0.39
SHKBP1-216ENST00000598201 WDR27A2RRH5 827 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 ANKRD65E5RJM6 399 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 UGT1A9O60656 530 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 BAIAP3O94812 1187 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 VIMP08670 466 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 HAPLN1P10915 354 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 RPA3P35244 121 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 SESN2P58004 480 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 TAF10Q12962 218 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 PIK3R6Q5UE93 754 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 ANKS3Q6ZW76 656 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 CTAGE3PQ8IX95 158 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 PPM1NQ8N819 430 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 SPPL2BQ8TCT7 592 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 ARNTL2Q8WYA1 636 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 TBC1D31Q96DN5 1066 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 SEC16BQ96JE7 1060 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 KLF6Q99612 283 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 UGT1A7Q9HAW7 530 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 UGT1A10Q9HAW8 530 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 UGT1A8Q9HAW9 530 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 TLR6Q9Y2C9 796 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 CDY1Q9Y6F8 540 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 TCP11X1B4DZS4 312 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 H7C4K7 107 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 TRDMT1O14717 391 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 EFCAB14O75071 495 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 EFEMP2O95967 443 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 RPL17P18621 184 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 MGAT1P26572 445 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 TUBP50607 506 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 EFEMP1Q12805 493 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 TEX44Q53QW1 395 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 ARHGAP18Q8N392 663 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 GSDMBQ8TAX9 411 aa17.46■□□□□ 0.39
SHKBP1-216ENST00000598201 STAMBPL1Q96FJ0 436 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 474.6 ms