RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CHRNB2P17787 502 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 TFE3P19532 575 aaPredicted RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 CDK11BP21127 795 aaKnown RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 MZF1P28698 734 aaPredicted RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 ACSL1P33121 698 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 SCNN1AP37088 669 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 PLK1P53350 603 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 ATXN3P54252 364 aaPredicted RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 MYL5Q02045 173 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 ARID5BQ14865 1188 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 STX1AQ16623 288 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 C2CD6Q53TS8 623 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 C9orf64Q5T6V5 341 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 TTC39BQ5VTQ0 682 aaPredicted RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 DCAF12L1Q5VU92 463 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 OTUD1Q5VV17 481 aaPredicted RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 PSAPL1Q6NUJ1 521 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 CIR1Q86X95 450 aaPredicted RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 ZNF677Q86XU0 584 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 EPS8L1Q8TE68 723 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 PGAP3Q96FM1 320 aaPredicted RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 RPL10LQ96L21 214 aaKnown RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 RPRD1AQ96P16 312 aaPredicted RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 GTPBP2Q9BX10 602 aaKnown RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 SIK2Q9H0K1 926 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 RSPH9Q9H1X1 276 aaPredicted RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 NLRC4Q9NPP4 1024 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 PIGVQ9NUD9 493 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 SUSD2Q9UGT4 822 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 NOCTQ9UK39 431 aaKnown RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 VANGL2Q9ULK5 521 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 SIK3Q9Y2K2 1263 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.54■□□□□ 0.08
LIG1-215ENST00000597901 A0A1B0GVM2 712 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 TCAF2A6NFQ2 919 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 MEI4A8MW99 385 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 EPHB6O15197 1021 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 SYPP08247 313 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 PDGFRAP16234 1089 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 CSRP1P21291 193 aaKnown RBP15.54■□□□□ 0.08
LIG1-215ENST00000597901 SOX5P35711 763 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 SULT1E1P49888 294 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 OXCT1P55809 520 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 JAM2P57087 298 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 NOMO3P69849 1222 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 CDR2Q01850 454 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 DEUP1Q05D60 604 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 ZNF177Q13360 481 aaPredicted RBP15.54■□□□□ 0.08
LIG1-215ENST00000597901 NCAPHQ15003 741 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 SYCP1Q15431 976 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 SLC25A52Q3SY17 297 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 C5orf22Q49AR2 442 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 CCDC183Q5T5S1 534 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 FAM102AQ5T9C2 384 aaPredicted RBP15.54■□□□□ 0.08
LIG1-215ENST00000597901 SH3PXD2AQ5TCZ1 1133 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 NAA35Q5VZE5 725 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 ZNF776Q68DI1 518 aaPredicted RBP15.54■□□□□ 0.08
LIG1-215ENST00000597901 SND1Q7KZF4 910 aaKnown RBP eCLIP15.54■□□□□ 0.08
LIG1-215ENST00000597901 DHX40Q8IX18 779 aaKnown RBP15.54■□□□□ 0.08
LIG1-215ENST00000597901 ANKRD20A12PQ8NF67 263 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 SLC20A1Q8WUM9 679 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 ALG14Q96F25 216 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 PCMTD1Q96MG8 357 aaPredicted RBP15.54■□□□□ 0.08
LIG1-215ENST00000597901 PPP1R9BQ96SB3 815 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 FAM129BQ96TA1 746 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 TBCBQ99426 244 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 FEM1AQ9BSK4 669 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 BTBD1Q9H0C5 482 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 TKTL2Q9H0I9 626 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 MIR1-1HGQ9H1L0 117 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 PCED1AQ9H1Q7 454 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 ANLNQ9NQW6 1124 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 ARHGEF38Q9NXL2 777 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 TMEM59LQ9UK28 342 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 ANGPTL2Q9UKU9 493 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 STAP1Q9ULZ2 295 aa15.54■□□□□ 0.08
LIG1-215ENST00000597901 A0A1B0GTW7 788 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 GOLGA8SH3BPF8 625 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 I6L893 689 aaPredicted RBP15.53■□□□□ 0.08
LIG1-215ENST00000597901 RNASEH1O60930 286 aaKnown RBP15.53■□□□□ 0.08
LIG1-215ENST00000597901 CYP1A1P04798 512 aaPredicted RBP15.53■□□□□ 0.08
LIG1-215ENST00000597901 CEACAM1P13688 526 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 ZNF18P17022 549 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 NNMTP40261 264 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 STAT1P42224 750 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 NUMBP49757 651 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 NOVA1P51513 510 aaKnown RBP15.53■□□□□ 0.08
LIG1-215ENST00000597901 IRAK1P51617 712 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 CENPCQ03188 943 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 UBXN1Q04323 297 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 SULT2A1Q06520 285 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 SEMA3BQ13214 749 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 BRMS1LQ5PSV4 323 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 RNF219Q5W0B1 726 aaPredicted RBP15.53■□□□□ 0.08
LIG1-215ENST00000597901 CXorf57Q6NSI4 855 aaKnown RBP15.53■□□□□ 0.08
LIG1-215ENST00000597901 MINDY1Q8N5J2 469 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 MSANTD4Q8NCY6 345 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 OR2I1PQ8NGU4 316 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 C1orf216Q8TAB5 229 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 C1orf74Q96LT6 269 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms