RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 SH3D19Q5HYK7 790 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 BSPRYQ5W0U4 402 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 DUS1LQ6P1R4 473 aaKnown RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 ZBTB8OSQ8IWT0 167 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 RNF148Q8N7C7 305 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 SLC4A5Q9BY07 1137 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 MTMR10Q9NXD2 777 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 SIX4Q9UIU6 781 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 CNOT11Q9UKZ1 510 aaKnown RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 PARP14Q460N5 1801 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 ZNF487B1APH4 448 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 H2AFYO75367 372 aaKnown RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 DGKIO75912 1065 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 BCAS2O75934 225 aaPredicted RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 GRTP1Q5TC63 336 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 TRIM67Q6ZTA4 783 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 CHERPQ8IWX8 916 aaKnown RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 ARNTL2Q8WYA1 636 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 EME1Q96AY2 570 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 PPP1R36Q96LQ0 422 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 CPNE1Q99829 537 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 NAT9Q9BTE0 207 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 ILKAPQ9H0C8 392 aaPredicted RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 WDR55Q9H6Y2 383 aaPredicted RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 WDR41Q9HAD4 459 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 G3V2L1 256 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 H0YIN7 160 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 SLC22A2O15244 555 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 MAGEB3O15480 346 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 TRIM13O60858 407 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 ERVK-10P10266 1014 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 PPARGP37231 505 aaPredicted RBP12.87□□□□□ -0.35
ZNF558-205ENST00000597304 CDK9P50750 372 aaKnown RBP12.87□□□□□ -0.35
ZNF558-205ENST00000597304 ART3Q13508 389 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 TARBP2Q15633 366 aaKnown RBP12.87□□□□□ -0.35
ZNF558-205ENST00000597304 LSM12Q3MHD2 195 aaKnown RBP12.87□□□□□ -0.35
ZNF558-205ENST00000597304 STYK1Q6J9G0 422 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 KLHL35Q6PF15 583 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 MPZL3Q6UWV2 235 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 LPCAT2Q7L5N7 544 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 PLD6Q8N2A8 252 aaKnown RBP12.87□□□□□ -0.35
ZNF558-205ENST00000597304 TMEM102Q8N9M5 508 aaPredicted RBP12.87□□□□□ -0.35
ZNF558-205ENST00000597304 FNDC8Q8TC99 324 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 SNRNP27Q8WVK2 155 aaKnown RBP12.87□□□□□ -0.35
ZNF558-205ENST00000597304 KLHL32Q96NJ5 620 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 NRBP2Q9NSY0 501 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 FAF1Q9UNN5 650 aaPredicted RBP12.87□□□□□ -0.35
ZNF558-205ENST00000597304 FER1L6Q2WGJ9 1857 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 SSC5DA1L4H1 1573 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 A0A0A0MRY4 1105 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 A0A1B0GTW7 788 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 COQ9O75208 318 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 RAD17O75943 681 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 ITGB3P05106 788 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 CXCL8P10145 99 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 MAGEA12P43365 314 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 RGS7P49802 495 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 SEL1L3Q68CR1 1132 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 C1orf127Q8N9H9 656 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 COLGALT1Q8NBJ5 622 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 RNF149Q8NC42 400 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 HTR3CQ8WXA8 447 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 HSPBAP1Q96EW2 488 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 CERS2Q96G23 380 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 ATXN7L3BQ96GX2 97 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 SPATA13Q96N96 652 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 DHX35Q9H5Z1 703 aaKnown RBP12.87□□□□□ -0.35
ZNF558-205ENST00000597304 GBA2Q9HCG7 927 aaPredicted RBP12.87□□□□□ -0.35
ZNF558-205ENST00000597304 SYBUQ9NX95 663 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 EPS15L1Q9UBC2 864 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 ADAM28Q9UKQ2 775 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 TSPAN16Q9UKR8 245 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 NR2E3Q9Y5X4 410 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 PTPRFP10586 1907 aa12.87□□□□□ -0.35
ZNF558-205ENST00000597304 MATN2O00339 956 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 HDAC3O15379 428 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 MAFO75444 373 aaPredicted RBP12.86□□□□□ -0.35
ZNF558-205ENST00000597304 AMHP03971 560 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 POLBP06746 335 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 NFICP08651 508 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 PROZP22891 400 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 MPSTP25325 297 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 EPHA3P29320 983 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 NRF1Q16656 503 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 CROCCP3Q8IVE0 287 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 HACE1Q8IYU2 909 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 TMEM130Q8N3G9 435 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 ISL2Q96A47 359 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 RBBP8Q99708 897 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 RPF1Q9H9Y2 349 aaKnown RBP12.86□□□□□ -0.35
ZNF558-205ENST00000597304 CYP3A43Q9HB55 503 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 EIF2B3Q9NR50 452 aaKnown RBP12.86□□□□□ -0.35
ZNF558-205ENST00000597304 PGAP2Q9UHJ9 254 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 SQORQ9Y6N5 450 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 MYO18AQ92614 2054 aaKnown RBP12.86□□□□□ -0.35
ZNF558-205ENST00000597304 ARHGEF37A1IGU5 675 aa12.86□□□□□ -0.35
ZNF558-205ENST00000597304 RNASEH2AO75792 299 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms