RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PITRM1Q5JRX3 1037 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 CXorf57Q6NSI4 855 aaKnown RBP13.47□□□□□ -0.25
USE1-207ENST00000596136 MMS22LQ6ZRQ5 1243 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 CYP2U1Q7Z449 544 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 CCAR2Q8N163 923 aaKnown RBP13.47□□□□□ -0.25
USE1-207ENST00000596136 SLC30A5Q8TAD4 765 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 ALG14Q96F25 216 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 SIPA1Q96FS4 1042 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 ZNF419Q96HQ0 510 aaPredicted RBP13.47□□□□□ -0.25
USE1-207ENST00000596136 NAP1L5Q96NT1 182 aaPredicted RBP13.47□□□□□ -0.25
USE1-207ENST00000596136 RTKNQ9BST9 563 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 TKTL2Q9H0I9 626 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 PRSS16Q9NQE7 514 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 WSB2Q9NYS7 404 aaPredicted RBP13.47□□□□□ -0.25
USE1-207ENST00000596136 SUN2Q9UH99 717 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 PILRBQ9UKJ0 227 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 CYP8B1Q9UNU6 501 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 DOCK4Q8N1I0 1966 aa13.47□□□□□ -0.25
USE1-207ENST00000596136 CACNA1EQ15878 2313 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 ITIH6Q6UXX5 1313 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.46□□□□□ -0.25
USE1-207ENST00000596136 C2CD4BA6NLJ0 364 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 DRGXA6NNA5 263 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 GOLGA8SH3BPF8 625 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 CLDN11O75508 207 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 MOCS3O95396 460 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 CCDC172P0C7W6 258 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 FERP16591 822 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 OXTRP30559 389 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 TPMTP51580 245 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 FOXK2Q01167 660 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 RPL6Q02878 288 aaKnown RBP13.46□□□□□ -0.25
USE1-207ENST00000596136 ZBTB16Q05516 673 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 DEUP1Q05D60 604 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 HNRNPA1L2Q32P51 320 aaKnown RBP13.46□□□□□ -0.25
USE1-207ENST00000596136 KIAA1324Q6UXG2 1013 aaKnown RBP13.46□□□□□ -0.25
USE1-207ENST00000596136 SND1Q7KZF4 910 aaKnown RBP eCLIP13.46□□□□□ -0.25
USE1-207ENST00000596136 C14orf80Q86SX3 495 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 SYT12Q8IV01 421 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 APCDD1Q8J025 514 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 C12orf50Q8NA57 414 aaPredicted RBP13.46□□□□□ -0.25
USE1-207ENST00000596136 CENPIQ92674 756 aaPredicted RBP13.46□□□□□ -0.25
USE1-207ENST00000596136 PRCCQ92733 491 aaPredicted RBP13.46□□□□□ -0.25
USE1-207ENST00000596136 ERLEC1Q96DZ1 483 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 RPRD1AQ96P16 312 aaPredicted RBP13.46□□□□□ -0.25
USE1-207ENST00000596136 HAPLN3Q96S86 360 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 AGPAT1Q99943 283 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 SMOC1Q9H4F8 434 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 CD93Q9NPY3 652 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 RXFP3Q9NSD7 469 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 TMEM74BQ9NUR3 256 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 EVLQ9UI08 416 aaPredicted RBP13.46□□□□□ -0.25
USE1-207ENST00000596136 CDV3Q9UKY7 258 aaKnown RBP13.46□□□□□ -0.25
USE1-207ENST00000596136 VANGL2Q9ULK5 521 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 ERVW-1Q9UQF0 538 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 TBC1D30Q9Y2I9 924 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 OR51B4Q9Y5P0 310 aa13.46□□□□□ -0.25
USE1-207ENST00000596136 SPTBN2O15020 2390 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 NUMA1Q14980 2115 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 IGLV3-10A0A075B6K4 115 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 TCRBV5S1A1TA0A578 114 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 TM4SF5O14894 197 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 CD6P30203 668 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 RDXP35241 583 aaKnown RBP13.45□□□□□ -0.26
USE1-207ENST00000596136 PTPN9P43378 593 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 NSFP46459 744 aaKnown RBP13.45□□□□□ -0.26
USE1-207ENST00000596136 IRAK1P51617 712 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 CDH4P55283 916 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 ST8SIA6P61647 398 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 ECT2LQ008S8 904 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 SULT2A1Q06520 285 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 ZNF33AQ06730 810 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 C1QBPQ07021 282 aaKnown RBP13.45□□□□□ -0.26
USE1-207ENST00000596136 CCDC14Q49A88 953 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 LYSMD4Q5XG99 296 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 TCEAL6Q6IPX3 200 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 MON1BQ7L1V2 547 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 CIR1Q86X95 450 aaPredicted RBP13.45□□□□□ -0.26
USE1-207ENST00000596136 SLC41A1Q8IVJ1 513 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 ZNF366Q8N895 744 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 CADM4Q8NFZ8 388 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 PIGKQ92643 395 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 TCEAL3Q969E4 200 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 TOE1Q96GM8 510 aaKnown RBP13.45□□□□□ -0.26
USE1-207ENST00000596136 CFAP57Q96MR6 1250 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 PPP1R9BQ96SB3 815 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 C11orf70Q9BRQ4 267 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 FEM1AQ9BSK4 669 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 TTYH3Q9C0H2 523 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 RSPH9Q9H1X1 276 aaPredicted RBP13.45□□□□□ -0.26
USE1-207ENST00000596136 CBX8Q9HC52 389 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 METTL5Q9NRN9 209 aaKnown RBP13.45□□□□□ -0.26
USE1-207ENST00000596136 AIPL1Q9NZN9 384 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 ADAM22Q9P0K1 906 aa13.45□□□□□ -0.26
USE1-207ENST00000596136 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.44□□□□□ -0.26
USE1-207ENST00000596136 LNP1A1A4G5 178 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 FAM170AA1A519 330 aa13.44□□□□□ -0.26
USE1-207ENST00000596136 TARSL2A2RTX5 802 aaKnown RBP13.44□□□□□ -0.26
USE1-207ENST00000596136 SIGLEC16A6NMB1 481 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms