RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 PITRM1Q5JRX3 1037 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 C6orf118Q5T5N4 469 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 HES3Q5TGS1 186 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 SFMBT2Q5VUG0 894 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 TCERG1LQ5VWI1 586 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 KANSL1Q7Z3B3 1105 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 EID2Q8N6I1 236 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 CLEC4CQ8WTT0 213 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 SLC35C1Q96A29 364 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 SLC39A13Q96H72 371 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 SPATA32Q96LK8 384 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 OMDQ99983 421 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 GOLPH3LQ9H4A5 285 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 GDF3Q9NR23 364 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 AASDHPPTQ9NRN7 309 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 SLCO3A1Q9UIG8 710 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 ERVW-1Q9UQF0 538 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 FLNBO75369 2602 aaKnown RBP10.33□□□□□ -0.76
LIG1-209ENST00000596104 KNTC1P50748 2209 aa10.33□□□□□ -0.76
LIG1-209ENST00000596104 COL5A1P20908 1838 aaPredicted RBP10.33□□□□□ -0.76
LIG1-209ENST00000596104 EDDM13A0A1B0GTR0 161 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 A0A1W2PQ27 194 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 A0A1W2PQ64 194 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 RNF225M0QZC1 329 aaPredicted RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 TK2O00142 265 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 TLR4O00206 839 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 ATXN7O15265 892 aaPredicted RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 SLC16A3O15427 465 aaKnown RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 LUC7L3O95232 432 aaKnown RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 ZIC2O95409 532 aaPredicted RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 GOT1P17174 413 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 ABCB4P21439 1286 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 C5AR1P21730 350 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 TBXAS1P24557 533 aaPredicted RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 DRD3P35462 400 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 PSMD8P48556 350 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 PPP2CBP62714 309 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 PPP2CAP67775 309 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 SEMG2Q02383 582 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 LRMPQ12912 555 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 BNIP3Q12983 259 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 CDH18Q13634 790 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 DCAF6Q58WW2 860 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 TMEM270Q6UE05 265 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 SPATS2Q86XZ4 545 aaKnown RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 HSCBQ8IWL3 235 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 APCDD1Q8J025 514 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 CFAP52Q8N1V2 620 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 STK40Q8N2I9 435 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 CARNMT1Q8N4J0 409 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 SNIP1Q8TAD8 396 aaKnown RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 DQX1Q8TE96 717 aaKnown RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 SLC39A7Q92504 469 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 PTPRN2Q92932 1015 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 KAT5Q92993 513 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 FAM131CQ96AQ9 280 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 SERAC1Q96JX3 654 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 HSFY1Q96LI6 401 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 SERPINB11Q96P15 392 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 DDX50Q9BQ39 737 aaKnown RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 NRSN2Q9GZP1 204 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 ERVMER34-1Q9H9K5 563 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 XPO7Q9UIA9 1087 aaKnown RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 TPX2Q9ULW0 747 aaKnown RBP10.32□□□□□ -0.76
LIG1-209ENST00000596104 TLR6Q9Y2C9 796 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 ZDHHC9Q9Y397 364 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 RAI2Q9Y5P3 530 aa10.32□□□□□ -0.76
LIG1-209ENST00000596104 TYW5A2RUC4 315 aaKnown RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 M0QYV0 167 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 FBXO21O94952 628 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 ZNF202O95125 648 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 ADH1BP00325 375 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 CALCAP01258 141 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 CENPBP07199 599 aaPredicted RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 HSP90AA1P07900 732 aaKnown RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 BRD2P25440 801 aaKnown RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 MZF1P28698 734 aaPredicted RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 PRCPP42785 496 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 RPL34P49207 117 aaKnown RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 ARRB1P49407 418 aaPredicted RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 STK19P49842 368 aaPredicted RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 METAP1P53582 386 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 PMS1P54277 932 aaKnown RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 KRT85P78386 507 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 FKBP3Q00688 224 aaKnown RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 ECT2LQ008S8 904 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 C19orf57Q0VDD7 668 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 ILKQ13418 452 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 ELAVL3Q14576 367 aaKnown RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 COBLL1Q53SF7 1204 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 ANKRD40Q6AI12 368 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 NAPEPLDQ6IQ20 393 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 SND1Q7KZF4 910 aaKnown RBP eCLIP10.31□□□□□ -0.76
LIG1-209ENST00000596104 TAC4Q86UU9 113 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 CACTIN-AS1Q8N1I8 211 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 OXR1Q8N573 874 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 MFSD2AQ8NA29 543 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 OR14C36Q8NHC7 312 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 RFFLQ8WZ73 363 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 RPL10LQ96L21 214 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms