RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ZYG11BQ9C0D3 744 aa19.9■□□□□ 0.78
PNKP-207ENST00000596014 DHX35Q9H5Z1 703 aaKnown RBP19.9■□□□□ 0.78
PNKP-207ENST00000596014 ABCB8Q9NUT2 735 aa19.9■□□□□ 0.78
PNKP-207ENST00000596014 SALL4Q9UJQ4 1053 aa19.9■□□□□ 0.78
PNKP-207ENST00000596014 ZNF318Q5VUA4 2279 aa19.89■□□□□ 0.78
PNKP-207ENST00000596014 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.89■□□□□ 0.77
PNKP-207ENST00000596014 ANTXRLA6NF34 631 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 RNF40O75150 1001 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 CD70P32970 193 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 SSR1P43307 286 aaKnown RBP19.89■□□□□ 0.77
PNKP-207ENST00000596014 SLC25A11Q02978 314 aaKnown RBP19.89■□□□□ 0.77
PNKP-207ENST00000596014 SEMA3BQ13214 749 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 ZNF177Q13360 481 aaPredicted RBP19.89■□□□□ 0.77
PNKP-207ENST00000596014 KCNT1Q5JUK3 1230 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 TXNRD3NBQ6F5E7 133 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 Q6ZS52 159 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 ANKS1BQ7Z6G8 1248 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 KIAA0907Q7Z7F0 614 aaPredicted RBP19.89■□□□□ 0.77
PNKP-207ENST00000596014 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.89■□□□□ 0.77
PNKP-207ENST00000596014 CHRDQ9H2X0 955 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 ZWILCHQ9H900 591 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 KCND1Q9NSA2 647 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 STARD13Q9Y3M8 1113 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 ADGRG1Q9Y653 693 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 CACNA1IQ9P0X4 2223 aa19.89■□□□□ 0.77
PNKP-207ENST00000596014 BTNL10A8MVZ5 291 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 RARAP10276 462 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 PABPC1P11940 636 aaKnown RBP19.88■□□□□ 0.77
PNKP-207ENST00000596014 TERF1P54274 439 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 LMAN2Q12907 356 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 GAS6Q14393 721 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 HADHQ16836 314 aaKnown RBP19.88■□□□□ 0.77
PNKP-207ENST00000596014 RWDD4Q6NW29 188 aaKnown RBP19.88■□□□□ 0.77
PNKP-207ENST00000596014 TXLNBQ8N3L3 684 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 CCDC26Q8TAB7 109 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 KIAA1522Q9P206 1035 aaPredicted RBP19.88■□□□□ 0.77
PNKP-207ENST00000596014 GGA2Q9UJY4 613 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 NEU3Q9UQ49 428 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 TBC1D30Q9Y2I9 924 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 KMT2EQ8IZD2 1858 aa19.88■□□□□ 0.77
PNKP-207ENST00000596014 CREB3O43889 395 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 MAGEA9P43362 315 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 KIR2DL1P43626 348 aaPredicted RBP19.87■□□□□ 0.77
PNKP-207ENST00000596014 SEC13P55735 322 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 KIF5AQ12840 1032 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 SMTNL2Q2TAL5 461 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 EMC10Q5UCC4 262 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 TMEM215Q68D42 235 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 CXorf57Q6NSI4 855 aaKnown RBP19.87■□□□□ 0.77
PNKP-207ENST00000596014 TFAP2DQ7Z6R9 452 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 TEKT4Q8WW24 435 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 TBC1D31Q96DN5 1066 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 EPAS1Q99814 870 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 ZNF212Q9UDV6 495 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 A0A0U1RQJ8 604 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 BUB1BO60566 1050 aaPredicted RBP19.87■□□□□ 0.77
PNKP-207ENST00000596014 TAS2R40P59535 323 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 C2orf27AQ580R0 203 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 ADIPOR2Q86V24 386 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 AHI1Q8N157 1196 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 WFIKKN2Q8TEU8 576 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 USP33Q8TEY7 942 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 ATRIPQ8WXE1 791 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 HSPH1Q92598 858 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 KCTD15Q96SI1 283 aaPredicted RBP19.87■□□□□ 0.77
PNKP-207ENST00000596014 RETREG1Q9H6L5 497 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 ELOVL2Q9NXB9 296 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 INTS6Q9UL03 887 aaKnown RBP19.87■□□□□ 0.77
PNKP-207ENST00000596014 HCN2Q9UL51 889 aa19.87■□□□□ 0.77
PNKP-207ENST00000596014 USP27XA6NNY8 438 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 TIMM44O43615 452 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 BUB1O43683 1085 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 CHRM1P11229 460 aaPredicted RBP19.86■□□□□ 0.77
PNKP-207ENST00000596014 RHOQP17081 205 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 EPHB2P29323 1055 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 OR1E1P30953 314 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 HOXC13P31276 330 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 MRPS21P82921 87 aaKnown RBP19.86■□□□□ 0.77
PNKP-207ENST00000596014 MTAPQ13126 283 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 EIF4HQ15056 248 aaKnown RBP19.86■□□□□ 0.77
PNKP-207ENST00000596014 DPYSL2Q16555 572 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 PPP6R3Q5H9R7 873 aaPredicted RBP19.86■□□□□ 0.77
PNKP-207ENST00000596014 PKN3Q6P5Z2 889 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 OR52K2Q8NGK3 314 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 RPLP0P6Q8NHW5 317 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 TPCN2Q8NHX9 752 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 KCNV2Q8TDN2 545 aa19.86■□□□□ 0.77
PNKP-207ENST00000596014 C16orf45Q96MC5 204 aaPredicted RBP19.86■□□□□ 0.77
PNKP-207ENST00000596014 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.86■□□□□ 0.77
PNKP-207ENST00000596014 WDFY4Q6ZS81 3184 aa19.85■□□□□ 0.77
PNKP-207ENST00000596014 HTR7P34969 479 aa19.85■□□□□ 0.77
PNKP-207ENST00000596014 TIE1P35590 1138 aa19.85■□□□□ 0.77
PNKP-207ENST00000596014 CSKP41240 450 aa19.85■□□□□ 0.77
PNKP-207ENST00000596014 SLC1A1P43005 524 aa19.85■□□□□ 0.77
PNKP-207ENST00000596014 OXCT1P55809 520 aa19.85■□□□□ 0.77
PNKP-207ENST00000596014 SLC12A1Q13621 1099 aa19.85■□□□□ 0.77
PNKP-207ENST00000596014 ATP13A4Q4VNC1 1196 aa19.85■□□□□ 0.77
PNKP-207ENST00000596014 SETD3Q86TU7 594 aaPredicted RBP19.85■□□□□ 0.77
PNKP-207ENST00000596014 NLRP14Q86W24 1093 aa19.85■□□□□ 0.77
PNKP-207ENST00000596014 CALR3Q96L12 384 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms