RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CRELD2Q6UXH1 353 aaPredicted RBP13.38□□□□□ -0.27
SCAF1-202ENST00000595242 NT5DC4Q86YG4 428 aa13.38□□□□□ -0.27
SCAF1-202ENST00000595242 ADGRF2Q8IZF7 708 aa13.38□□□□□ -0.27
SCAF1-202ENST00000595242 TOP6BLQ8N6T0 577 aa13.38□□□□□ -0.27
SCAF1-202ENST00000595242 SHC3Q92529 594 aa13.38□□□□□ -0.27
SCAF1-202ENST00000595242 MYLPFQ96A32 169 aa13.38□□□□□ -0.27
SCAF1-202ENST00000595242 WBP1Q96G27 269 aa13.38□□□□□ -0.27
SCAF1-202ENST00000595242 SLITRK1Q96PX8 696 aa13.38□□□□□ -0.27
SCAF1-202ENST00000595242 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCAF1-202ENST00000595242 MKRN2Q9H000 416 aaKnown RBP13.38□□□□□ -0.27
SCAF1-202ENST00000595242 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCAF1-202ENST00000595242 SNX12Q9UMY4 172 aa13.38□□□□□ -0.27
SCAF1-202ENST00000595242 SNX9Q9Y5X1 595 aa13.38□□□□□ -0.27
SCAF1-202ENST00000595242 V9GYY5 206 aaPredicted RBP13.38□□□□□ -0.27
SCAF1-202ENST00000595242 CTAGE15A4D2H0 777 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 GFRA2O00451 464 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 TRIM66O15016 1216 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 CTAGE8P0CG41 777 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 TCP1P17987 556 aaKnown RBP13.37□□□□□ -0.27
SCAF1-202ENST00000595242 LMO2P25791 158 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 OXTRP30559 389 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 IL12RB1P42701 662 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 MFAP3P55082 362 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 PSMC1P62191 440 aaKnown RBP13.37□□□□□ -0.27
SCAF1-202ENST00000595242 TFAMQ00059 246 aaKnown RBP13.37□□□□□ -0.27
SCAF1-202ENST00000595242 GCNT1Q02742 428 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 TCEAL1Q15170 157 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 IFI16Q16666 785 aaKnown RBP13.37□□□□□ -0.27
SCAF1-202ENST00000595242 SOWAHAQ2M3V2 549 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 ZACNQ401N2 412 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 FUT11Q495W5 492 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 TDRD10Q5VZ19 366 aaKnown RBP13.37□□□□□ -0.27
SCAF1-202ENST00000595242 SV2AQ7L0J3 742 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 ENOSF1Q7L5Y1 443 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 CTAGE6Q86UF2 777 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 CTAGE4Q8IX94 777 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 SPACA3Q8IXA5 215 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 FAM71AQ8IYT1 594 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 SEMA4DQ92854 862 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 TMEM176AQ96HP8 235 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 ZFRQ96KR1 1074 aaKnown RBP13.37□□□□□ -0.27
SCAF1-202ENST00000595242 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 XPO6Q96QU8 1125 aaKnown RBP13.37□□□□□ -0.27
SCAF1-202ENST00000595242 CGRRF1Q99675 332 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 SYT15Q9BQS2 421 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 FAM213AQ9BRX8 229 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 PACSIN1Q9BY11 444 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 UBE2TQ9NPD8 197 aaPredicted RBP13.37□□□□□ -0.27
SCAF1-202ENST00000595242 CRTAC1Q9NQ79 661 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 RAB20Q9NX57 234 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 GDAP2Q9NXN4 497 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 ANKRD6Q9Y2G4 727 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 HYOU1Q9Y4L1 999 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 PCDHGA1Q9Y5H4 931 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 SLCO1B1Q9Y6L6 691 aa13.37□□□□□ -0.27
SCAF1-202ENST00000595242 NEDD8-MDP1E9PL57 170 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 F8VP50 259 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 FOXN3O00409 490 aaPredicted RBP13.36□□□□□ -0.27
SCAF1-202ENST00000595242 ENC1O14682 589 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 COCHO43405 550 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 SLC28A2O43868 658 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 IL18RAPO95256 599 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 C4BPAP04003 597 aaKnown RBP13.36□□□□□ -0.27
SCAF1-202ENST00000595242 H2AFZP0C0S5 128 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 TMEM253P0C7T8 217 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 PNMA6AP0CW24 399 aaPredicted RBP13.36□□□□□ -0.27
SCAF1-202ENST00000595242 C6P13671 934 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 CCT8P50990 548 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 AP3M2P53677 418 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 IL9RQ01113 521 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 POU5F1Q01860 360 aaKnown RBP13.36□□□□□ -0.27
SCAF1-202ENST00000595242 RHDQ02161 417 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 IFRD2Q12894 506 aaPredicted RBP13.36□□□□□ -0.27
SCAF1-202ENST00000595242 LY6DQ14210 128 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 STARD3Q14849 445 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 TEAD4Q15561 434 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 MAPRE1Q15691 268 aaKnown RBP13.36□□□□□ -0.27
SCAF1-202ENST00000595242 INAVAQ3KP66 663 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 FBXO38Q6PIJ6 1188 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 H2AFVQ71UI9 128 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 BRSK2Q8IWQ3 736 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 LRRC52Q8N7C0 313 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 C1orf127Q8N9H9 656 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 TAS1R2Q8TE23 839 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 SNX19Q92543 992 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 IGSF8Q969P0 613 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 CALR3Q96L12 384 aaKnown RBP13.36□□□□□ -0.27
SCAF1-202ENST00000595242 KREMEN1Q96MU8 473 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 BBS2Q9BXC9 721 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 CDH9Q9ULB4 789 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 STON1Q9Y6Q2 735 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 TEX15Q9BXT5 2789 aa13.36□□□□□ -0.27
SCAF1-202ENST00000595242 H0Y8X5 98 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 CES2O00748 559 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 RRP9O43818 475 aaKnown RBP13.35□□□□□ -0.27
SCAF1-202ENST00000595242 CACNG3O60359 315 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 BRINP1O60477 761 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 KRT19P08727 400 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 CDK4P11802 303 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms