RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ELK3P41970 407 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 USP46P62068 366 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 CDKL3Q8IVW4 592 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 KBTBD2Q8IY47 623 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 CD99L2Q8TCZ2 262 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 NAT14Q8WUY8 206 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 MYLPFQ96A32 169 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 PTCD3Q96EY7 689 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 TRPV6Q9H1D0 765 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 DTLQ9NZJ0 730 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 DNAJB4Q9UDY4 337 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 RABGEF1Q9UJ41 708 aa17.53■□□□□ 0.4
SHKBP1-205ENST00000594973 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 CFAP69A5D8W1 941 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 E7ESA3 106 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 F8W8V4 182 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 ATP6V1G1O75348 118 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 FYNP06241 537 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 PIM1P11309 404 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 PCSK1P29120 753 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 DAOAP59103 153 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 PKN2Q16513 984 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 FYB2Q5VWT5 728 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 ARHGAP24Q8N264 748 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 NT5C3BQ969T7 300 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 RTP4Q96DX8 246 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 SLC2A13Q96QE2 648 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 TUBGCP5Q96RT8 1024 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 EPB41L1Q9H4G0 881 aa17.52■□□□□ 0.4
SHKBP1-205ENST00000594973 SMIM31A0A1B0GVY4 71 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 ZNF487B1APH4 448 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 F5H423 210 aaPredicted RBP17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 CHADO15335 359 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 PFDN1O60925 122 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 SPAG7O75391 227 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 TRPA1O75762 1119 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 BDNFP23560 247 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 INHBCP55103 352 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 DSG1Q02413 1049 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 TRIM71Q2Q1W2 868 aaKnown RBP17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 RNF139Q8WU17 664 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 EDEM1Q92611 657 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 PPP2R3CQ969Q6 453 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 MCUR1Q96AQ8 359 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 PGBD4Q96DM1 585 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 SMARCD1Q96GM5 515 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 NSL1Q96IY1 281 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 KLC2Q9H0B6 622 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 SLCO1B3Q9NPD5 702 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 ARHGEF4Q9NR80 690 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 SENP1Q9P0U3 644 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 USP3Q9Y6I4 520 aa17.52■□□□□ 0.39
SHKBP1-205ENST00000594973 GYG2O15488 501 aa17.51■□□□□ 0.39
SHKBP1-205ENST00000594973 ZCCHC18P0CG32 403 aa17.51■□□□□ 0.39
SHKBP1-205ENST00000594973 NR2C2P49116 596 aa17.51■□□□□ 0.39
SHKBP1-205ENST00000594973 GEMIN4P57678 1058 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-205ENST00000594973 METTL23Q86XA0 190 aa17.51■□□□□ 0.39
SHKBP1-205ENST00000594973 C4orf33Q8N1A6 199 aa17.51■□□□□ 0.39
SHKBP1-205ENST00000594973 TMEM209Q96SK2 561 aa17.51■□□□□ 0.39
SHKBP1-205ENST00000594973 LGMNQ99538 433 aa17.51■□□□□ 0.39
SHKBP1-205ENST00000594973 SRRDQ9UH36 339 aa17.51■□□□□ 0.39
SHKBP1-205ENST00000594973 FBXO21O94952 628 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 METTL18O95568 372 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 ITGA2BP08514 1039 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 CRABP2P29373 138 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 TUSC3Q13454 348 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 ITGA9Q13797 1035 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 TMEM259Q4ZIN3 620 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 HEATR6Q6AI08 1181 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 MTDHQ86UE4 582 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 TRABD2AQ86V40 505 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 TDRPQ86YL5 185 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 VPS52Q8N1B4 723 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 RAET1EQ8TD07 263 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 GLT1D1Q96MS3 346 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 DDX50Q9BQ39 737 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 PHACTR1Q9C0D0 580 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 TMLHEQ9NVH6 421 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 PSMC3IPQ9P2W1 217 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 ZNF232Q9UNY5 417 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 PTCH2Q9Y6C5 1203 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 KBTBD13C9JR72 458 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 MFSD11O43934 449 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 TROVE2P10155 538 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 CKBP12277 381 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 VAV1P15498 845 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 YWHAGP61981 247 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 EFHC2Q5JST6 749 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 CD300LGQ6UXG3 332 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 CAPNS2Q96L46 248 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 QKIQ96PU8 341 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 ECSITQ9BQ95 431 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 CNGB3Q9NQW8 809 aa17.5■□□□□ 0.39
SHKBP1-205ENST00000594973 HAUS5O94927 633 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 AMHP03971 560 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 RAP1GDS1P52306 607 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 SULT2A1Q06520 285 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 KRT72Q14CN4 511 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 RAB41Q5JT25 222 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 OVOS1Q6IE37 1185 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms