RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 PCDH8O95206 1070 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 AHSGP02765 367 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 RPS2P15880 293 aaKnown RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 TFEBP19484 476 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 IL4RP24394 825 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 TBXAS1P24557 533 aaPredicted RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 MAPK3P27361 379 aaPredicted RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 CIITAP33076 1130 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 ARL4AP40617 200 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 GPR15P49685 360 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 BCAT1P54687 386 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 MLLT6P55198 1093 aaPredicted RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 GRIN1Q05586 938 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 LRRC74AQ0VAA2 488 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 DBPQ10586 325 aaPredicted RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 TARDBPQ13148 414 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 TNFAIP1Q13829 316 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 NFE2L1Q14494 772 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 RSPO4Q2I0M5 234 aaPredicted RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 SHROOM1Q2M3G4 852 aaPredicted RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 CCDC178Q5BJE1 867 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 RALGPS1Q5JS13 557 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 C11orf88Q6PI97 169 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 LRSAM1Q6UWE0 723 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 KIF6Q6ZMV9 814 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 KIAA0408Q6ZU52 694 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 IKBIPQ70UQ0 350 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 ZER1Q7Z7L7 766 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 ZDHHC13Q8IUH4 622 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 ADHFE1Q8IWW8 467 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 CERS5Q8N5B7 392 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 DCBLD1Q8N8Z6 715 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 MIGA1Q8NAN2 632 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 ZBTB8BQ8NAP8 495 aaPredicted RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 CPT1CQ8TCG5 803 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 NEK9Q8TD19 979 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 BRIX1Q8TDN6 353 aaKnown RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 DENND1AQ8TEH3 1009 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 SEPT1Q8WYJ6 367 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 KCNN1Q92952 543 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 VPS33AQ96AX1 596 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 TRIM44Q96DX7 344 aaPredicted RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 RUNDC3BQ96NL0 473 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 DACH2Q96NX9 599 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 DNAI2Q9GZS0 605 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 TMEM39BQ9GZU3 492 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 ANKRD2Q9GZV1 360 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 CHST8Q9H2A9 424 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 FANCFQ9NPI8 374 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 ADPRHL2Q9NX46 363 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 MCM9Q9NXL9 1143 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 BTBD7Q9P203 1132 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 ZNF70Q9UC06 446 aaPredicted RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 ZNF212Q9UDV6 495 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 AJAP1Q9UKB5 411 aaPredicted RBP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 USP18Q9UMW8 372 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 DERAQ9Y315 318 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 DTNAQ9Y4J8 743 aa4.45□□□□□ -1.7
LINC00649-204ENST00000593977 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC00649-204ENST00000593977 PLXNB2O15031 1838 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 CFAP46Q8IYW2 2715 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 A0A0U1RQK1 487 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 ZNF320A2RRD8 509 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 VWA3AA6NCI4 1184 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 KRT87PA6NCN2 255 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 A8MV72 311 aaPredicted RBP4.44□□□□□ -1.7
LINC00649-204ENST00000593977 E7EVH7 732 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 H0YAE9 185 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 BTN3A1O00481 513 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 TXNL1O43396 289 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 KERAO60938 352 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 TIMP1P01033 207 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 CYBBP04839 570 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 H2AFB1P0C5Y9 115 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 H2AFB2P0C5Z0 115 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 CCDC159P0C7I6 412 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 UBL4AP11441 157 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 EEF2P13639 858 aaKnown RBP4.44□□□□□ -1.7
LINC00649-204ENST00000593977 EGR1P18146 543 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 MALP21145 153 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 PSMA4P25789 261 aaKnown RBP4.44□□□□□ -1.7
LINC00649-204ENST00000593977 EPHA8P29322 1005 aaPredicted RBP4.44□□□□□ -1.7
LINC00649-204ENST00000593977 GCH1P30793 250 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 HARS2P49590 506 aaKnown RBP4.44□□□□□ -1.7
LINC00649-204ENST00000593977 SESN2P58004 480 aaPredicted RBP4.44□□□□□ -1.7
LINC00649-204ENST00000593977 CDC42EP1Q00587 391 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 ACTN3Q08043 901 aaPredicted RBP4.44□□□□□ -1.7
LINC00649-204ENST00000593977 MRPL28Q13084 256 aaKnown RBP4.44□□□□□ -1.7
LINC00649-204ENST00000593977 SLC13A2Q13183 592 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 PPIGQ13427 754 aaKnown RBP eCLIP4.44□□□□□ -1.7
LINC00649-204ENST00000593977 DCTN2Q13561 401 aaKnown RBP4.44□□□□□ -1.7
LINC00649-204ENST00000593977 NAA25Q14CX7 972 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 ANKRD1Q15327 319 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 SEC23BQ15437 767 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 CCL14Q16627 93 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 GARNL3Q5VVW2 1013 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 RAP1GAP2Q684P5 730 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 C16orf87Q6PH81 154 aa4.44□□□□□ -1.7
LINC00649-204ENST00000593977 GAREM2Q75VX8 874 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms