RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 H0Y8X5 98 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 MID1O15344 667 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 IGLV3-25P01717 112 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 CTSOP43234 321 aaPredicted RBP24.74■■□□□ 1.55
LSM4-202ENST00000593564 GRK6P43250 576 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 GALCP54803 685 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 STX17P56962 302 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 RACK1P63244 317 aaKnown RBP24.74■■□□□ 1.55
LSM4-202ENST00000593564 ZC3H12AQ5D1E8 599 aaKnown RBP24.74■■□□□ 1.55
LSM4-202ENST00000593564 KCNT1Q5JUK3 1230 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 RAP1GAP2Q684P5 730 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 TMEM110Q86TL2 294 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 CHSY1Q86X52 802 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 ZNF606Q8WXB4 792 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 MED15Q96RN5 788 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 CCDC86Q9H6F5 360 aaKnown RBP24.74■■□□□ 1.55
LSM4-202ENST00000593564 UBE2TQ9NPD8 197 aaPredicted RBP24.74■■□□□ 1.55
LSM4-202ENST00000593564 TJP2Q9UDY2 1190 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 ADAMTS1Q9UHI8 967 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 CYTH4Q9UIA0 394 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 FZD4Q9ULV1 537 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 LHX6Q9UPM6 363 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 LAMA5O15230 3695 aa24.74■■□□□ 1.55
LSM4-202ENST00000593564 PLXNB3Q9ULL4 1909 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 EDDM13A0A1B0GTR0 161 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 A0A1W2PP55 124 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 TTC34A8MYJ7 566 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 E5RJQ4 531 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 KCNK3O14649 394 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 VILLO15195 856 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 LETM1O95202 739 aaPredicted RBP24.73■■□□□ 1.55
LSM4-202ENST00000593564 TRUB2O95900 331 aaKnown RBP24.73■■□□□ 1.55
LSM4-202ENST00000593564 TACR2P21452 398 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 ECT2LQ008S8 904 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 NCEH1Q6PIU2 408 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 LRSAM1Q6UWE0 723 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 ENOSF1Q7L5Y1 443 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 MMAAQ8IVH4 418 aaKnown RBP24.73■■□□□ 1.55
LSM4-202ENST00000593564 SRRTQ9BXP5 876 aaKnown RBP24.73■■□□□ 1.55
LSM4-202ENST00000593564 ACE2Q9BYF1 805 aaPredicted RBP24.73■■□□□ 1.55
LSM4-202ENST00000593564 NEUROG2Q9H2A3 272 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 THAP9Q9H5L6 903 aa24.73■■□□□ 1.55
LSM4-202ENST00000593564 FAM47DPA6NHR8 397 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 LRRC72A6NJI9 287 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 C10orf142B7Z368 130 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 BIN1O00499 593 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 TNFSF14O43557 240 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 DFNA5O60443 496 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 GNA15P30679 374 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 YWHAZP63104 245 aaKnown RBP24.72■■□□□ 1.55
LSM4-202ENST00000593564 EIF4EBP2Q13542 120 aaPredicted RBP24.72■■□□□ 1.55
LSM4-202ENST00000593564 OR2T34Q8NGX1 318 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 FAM129BQ96TA1 746 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 SLCO3A1Q9UIG8 710 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 CEP83Q9Y592 693 aa24.72■■□□□ 1.55
LSM4-202ENST00000593564 APC2O95996 2303 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 ACACAQ13085 2346 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 THAP12O43422 761 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 RNASEH2AO75792 299 aaKnown RBP24.71■■□□□ 1.55
LSM4-202ENST00000593564 FGFR1OPO95684 399 aaKnown RBP24.71■■□□□ 1.55
LSM4-202ENST00000593564 SLC8A1P32418 973 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 C21orf59P57076 290 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 PDCLQ13371 301 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 INAVAQ3KP66 663 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 RNF219Q5W0B1 726 aaPredicted RBP24.71■■□□□ 1.55
LSM4-202ENST00000593564 APCDD1Q8J025 514 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 SLC6A18Q96N87 628 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 OMDQ99983 421 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.71■■□□□ 1.55
LSM4-202ENST00000593564 ITPR1Q14643 2758 aa24.71■■□□□ 1.55
LSM4-202ENST00000593564 TMEM131Q92545 1883 aa24.7■■□□□ 1.55
LSM4-202ENST00000593564 F5H5T6 163 aa24.7■■□□□ 1.54
LSM4-202ENST00000593564 PITX1P78337 314 aaPredicted RBP24.7■■□□□ 1.54
LSM4-202ENST00000593564 SLC12A1Q13621 1099 aa24.7■■□□□ 1.54
LSM4-202ENST00000593564 ATP6V0D2Q8N8Y2 350 aa24.7■■□□□ 1.54
LSM4-202ENST00000593564 SKA1Q96BD8 255 aa24.7■■□□□ 1.54
LSM4-202ENST00000593564 FAM81BQ96LP2 452 aa24.7■■□□□ 1.54
LSM4-202ENST00000593564 PRMT1Q99873 361 aaKnown RBP24.7■■□□□ 1.54
LSM4-202ENST00000593564 EBF2Q9HAK2 575 aa24.7■■□□□ 1.54
LSM4-202ENST00000593564 ACP6Q9NPH0 428 aa24.7■■□□□ 1.54
LSM4-202ENST00000593564 SLC12A6Q9UHW9 1150 aa24.7■■□□□ 1.54
LSM4-202ENST00000593564 GPSM3Q9Y4H4 160 aa24.7■■□□□ 1.54
LSM4-202ENST00000593564 PTPRBP23467 1997 aa24.7■■□□□ 1.54
LSM4-202ENST00000593564 A0A1B0GTQ1 180 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 GOLGA8CPA6NN73 597 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 KCNU1A8MYU2 1149 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 ADH1BP00325 375 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 GOT1P17174 413 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 C5AR1P21730 350 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 PSMD8P48556 350 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 CCR5P51681 352 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 KCNJ12Q14500 433 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 TAF5Q15542 800 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 TTC39BQ5VTQ0 682 aaPredicted RBP24.69■■□□□ 1.54
LSM4-202ENST00000593564 SND1Q7KZF4 910 aaKnown RBP eCLIP24.69■■□□□ 1.54
LSM4-202ENST00000593564 STK40Q8N2I9 435 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 GALNT15Q8N3T1 639 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 AADATQ8N5Z0 425 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 PTPRN2Q92932 1015 aa24.69■■□□□ 1.54
LSM4-202ENST00000593564 RPL10LQ96L21 214 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms