RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 UNC45BQ8IWX7 931 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 FAM160A2Q8N612 972 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-219ENST00000592927 KIAA1958Q8N8K9 716 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 RIN3Q8TB24 985 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 RNF34Q969K3 372 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 NT5C3BQ969T7 300 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 CAPZA3Q96KX2 299 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 CFAP57Q96MR6 1250 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 TBCBQ99426 244 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 PSMB7Q99436 277 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 NPY6RQ99463 290 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 DCLK3Q9C098 648 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 TMEM51Q9NW97 253 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 DUS2Q9NX74 493 aaKnown RBP12.3□□□□□ -0.44
DDX39A-219ENST00000592927 DDX56Q9NY93 547 aaKnown RBP12.3□□□□□ -0.44
DDX39A-219ENST00000592927 COX16Q9P0S2 106 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 TBC1D14Q9P2M4 693 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 NDRG2Q9UN36 371 aaKnown RBP12.3□□□□□ -0.44
DDX39A-219ENST00000592927 TLR6Q9Y2C9 796 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 ZNF510Q9Y2H8 683 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 NBEAQ8NFP9 2946 aa12.3□□□□□ -0.44
DDX39A-219ENST00000592927 DENND4CQ5VZ89 1909 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 ANAPC1Q9H1A4 1944 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 SHISA7A6NL88 538 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 CHURC1-FNTBB4DL54 471 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 SCAMP3O14828 347 aaKnown RBP12.29□□□□□ -0.44
DDX39A-219ENST00000592927 GIPC1O14908 333 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 AXIN1O15169 862 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 ZNF185O15231 689 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 CHADO15335 359 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 IRAK2O43187 625 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 CTIFO43310 598 aaKnown RBP12.29□□□□□ -0.44
DDX39A-219ENST00000592927 CEP104O60308 925 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 F9P00740 461 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 IGLV3-25P01717 112 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 APOEP02649 317 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 SLC2A3P11169 496 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 CORO1AP31146 461 aaKnown RBP12.29□□□□□ -0.44
DDX39A-219ENST00000592927 CCR1P32246 355 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 IFNAR2P48551 515 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 FNTBP49356 437 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 DNA2P51530 1060 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 ATP11AP98196 1134 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 PDGFRLQ15198 375 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 CDO1Q16878 200 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 CCDC14Q49A88 953 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 ZC3H12AQ5D1E8 599 aaKnown RBP12.29□□□□□ -0.44
DDX39A-219ENST00000592927 NUGGCQ68CJ6 796 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 HTR3DQ70Z44 454 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 DENND1CQ8IV53 801 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 KATNAL2Q8IYT4 538 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 EXD1Q8NHP7 514 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 OSCP1Q8WVF1 389 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 ALG3Q92685 438 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 KRT35Q92764 455 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 IRF7Q92985 503 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 WBP2Q969T9 261 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 ZFYVE19Q96K21 471 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 ARRDC1-AS1Q9H2J1 176 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 CHRDQ9H2X0 955 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 BRD9Q9H8M2 597 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 HEBP1Q9NRV9 189 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 SLC12A6Q9UHW9 1150 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 DOCK8Q8NF50 2099 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 MIA3Q5JRA6 1907 aa12.29□□□□□ -0.44
DDX39A-219ENST00000592927 GREM1O60565 184 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 LRCH4O75427 683 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 IGLV3-27P01718 113 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 KLKB1P03952 638 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 ZNF806P0C7X5 589 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 TFE3P19532 575 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 CNR2P34972 360 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 RDXP35241 583 aaKnown RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 SSR1P43307 286 aaKnown RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 SLC11A2P49281 568 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 NOVA1P51513 510 aaKnown RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 CCR3P51677 355 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 COPS2P61201 443 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 SATB1Q01826 763 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 EIF4EBP2Q13542 120 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 C15orf59Q2T9L4 293 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 OTUD1Q5VV17 481 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 STRADAQ7RTN6 431 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 BBS7Q8IWZ6 715 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 FAM172AQ8WUF8 416 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 MAIP1Q8WWC4 291 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 CENPIQ92674 756 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 OTUB2Q96DC9 234 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 PGAP3Q96FM1 320 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 SLC39A13Q96H72 371 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 FCRL2Q96LA5 508 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 FAM83CQ9BQN1 747 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 SCNM1Q9BWG6 230 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 LINC00597Q9H2U6 94 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 PIGVQ9NUD9 493 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 AGO1Q9UL18 857 aaKnown RBP12.28□□□□□ -0.44
DDX39A-219ENST00000592927 WNT6Q9Y6F9 365 aa12.28□□□□□ -0.44
DDX39A-219ENST00000592927 CNOT1A5YKK6 2376 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms