RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 PTP4A2Q12974 167 aa20.83■□□□□ 0.93
CIRBP-239ENST00000592467 ARID5BQ14865 1188 aa20.83■□□□□ 0.93
CIRBP-239ENST00000592467 PLEKHG6Q3KR16 790 aa20.83■□□□□ 0.93
CIRBP-239ENST00000592467 SLC25A52Q3SY17 297 aa20.83■□□□□ 0.93
CIRBP-239ENST00000592467 FAM102AQ5T9C2 384 aaPredicted RBP20.83■□□□□ 0.93
CIRBP-239ENST00000592467 SLC23A3Q6PIS1 610 aa20.83■□□□□ 0.93
CIRBP-239ENST00000592467 ARCQ7LC44 396 aa20.83■□□□□ 0.93
CIRBP-239ENST00000592467 KDM1BQ8NB78 822 aa20.83■□□□□ 0.93
CIRBP-239ENST00000592467 PRCCQ92733 491 aaPredicted RBP20.83■□□□□ 0.93
CIRBP-239ENST00000592467 TOE1Q96GM8 510 aaKnown RBP20.83■□□□□ 0.93
CIRBP-239ENST00000592467 KIAA1522Q9P206 1035 aaPredicted RBP20.83■□□□□ 0.93
CIRBP-239ENST00000592467 DOCK4Q8N1I0 1966 aa20.83■□□□□ 0.92
CIRBP-239ENST00000592467 ITIH6Q6UXX5 1313 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 A0A1B0GVM2 712 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 TCAF2A6NFQ2 919 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 H0Y626 953 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 ASLP04424 464 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 MZF1P28698 734 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-239ENST00000592467 HOXD12P35452 270 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 STAT1P42224 750 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 SULT1E1P49888 294 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 TRIM61Q5EBN2 209 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 BRMS1LQ5PSV4 323 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 TTC39BQ5VTQ0 682 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-239ENST00000592467 CAVIN1Q6NZI2 390 aaKnown RBP20.82■□□□□ 0.92
CIRBP-239ENST00000592467 CACUL1Q86Y37 369 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 NEK11Q8NG66 645 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 RNF34Q969K3 372 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 HSPA12BQ96MM6 686 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 TMPRSS4Q9NRS4 437 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 ERVW-1Q9UQF0 538 aa20.82■□□□□ 0.92
CIRBP-239ENST00000592467 NCOR2Q9Y618 2525 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 SPTBN2O15020 2390 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 TEX33O43247 280 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 CDK11BP21127 795 aaKnown RBP20.81■□□□□ 0.92
CIRBP-239ENST00000592467 DPP6P42658 865 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 RPS14P62263 151 aaKnown RBP20.81■□□□□ 0.92
CIRBP-239ENST00000592467 MTA1Q13330 715 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 HNRNPA1L2Q32P51 320 aaKnown RBP20.81■□□□□ 0.92
CIRBP-239ENST00000592467 ANKRD20A12PQ8NF67 263 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 SPAG5Q96R06 1193 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 TKTL2Q9H0I9 626 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 FBRSQ9HAH7 460 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 CAPN10Q9HC96 672 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 SLCO3A1Q9UIG8 710 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 VANGL2Q9ULK5 521 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 STAP1Q9ULZ2 295 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 OR51B4Q9Y5P0 310 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 SNX10Q9Y5X0 201 aa20.81■□□□□ 0.92
CIRBP-239ENST00000592467 C4orf47A7E2U8 309 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 GOLGA8SH3BPF8 625 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 ENDOD1O94919 500 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 SRPRAP08240 638 aaKnown RBP20.8■□□□□ 0.92
CIRBP-239ENST00000592467 DEUP1Q05D60 604 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 SLC12A1Q13621 1099 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 RAB6CQ53S08 254 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 RABGAP1LQ5R372 815 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 C9orf64Q5T6V5 341 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 CADM4Q8NFZ8 388 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 SLC30A5Q8TAD4 765 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 DNASE2BQ8WZ79 361 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 CFAP57Q96MR6 1250 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 RPRD1AQ96P16 312 aaPredicted RBP20.8■□□□□ 0.92
CIRBP-239ENST00000592467 GPR174Q9BXC1 333 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 RAB6CQ9H0N0 254 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 RSPH9Q9H1X1 276 aaPredicted RBP20.8■□□□□ 0.92
CIRBP-239ENST00000592467 WDCPQ9H6R7 721 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 RTN4Q9NQC3 1192 aaKnown RBP20.8■□□□□ 0.92
CIRBP-239ENST00000592467 FSCN3Q9NQT6 498 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 SUN2Q9UH99 717 aa20.8■□□□□ 0.92
CIRBP-239ENST00000592467 TTC34A8MYJ7 566 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 SIN3BO75182 1162 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 NDUFS2O75306 463 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 CNTN5O94779 1100 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 F9P00740 461 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 PDGFRAP16234 1089 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 OXTRP30559 389 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 GSCP56915 257 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-239ENST00000592467 ECT2LQ008S8 904 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 IQCB1Q15051 598 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 DUOXA1Q1HG43 343 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 TRIM72Q6ZMU5 477 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 EMC1Q8N766 993 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 METTL5Q9NRN9 209 aaKnown RBP20.79■□□□□ 0.92
CIRBP-239ENST00000592467 TBC1D30Q9Y2I9 924 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 CACNA1EQ15878 2313 aa20.79■□□□□ 0.92
CIRBP-239ENST00000592467 CNOT1A5YKK6 2376 aaKnown RBP20.79■□□□□ 0.92
CIRBP-239ENST00000592467 DRGXA6NNA5 263 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 METTL12A8MUP2 240 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 SERPINF2P08697 491 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 ENGP17813 658 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 MAOBP27338 520 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 ACSL1P33121 698 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 NUMBP49757 651 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 STK19P49842 368 aaPredicted RBP20.78■□□□□ 0.92
CIRBP-239ENST00000592467 ZBTB16Q05516 673 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 CLEC16AQ2KHT3 1053 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 ALFQ53S48 1182 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 PPM1JQ5JR12 505 aa20.78■□□□□ 0.92
CIRBP-239ENST00000592467 IL31Q6EBC2 164 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms