RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 TP73O15350 636 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 SORBS3O60504 671 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 TCEA3O75764 348 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 CD247P20963 164 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 IVDP26440 423 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 ESRRGP62508 458 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 SMARCB1Q12824 385 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 MTMR2Q13614 643 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 ZNF618Q5T7W0 954 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 PXDC1Q5TGL8 231 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 FAM160B2Q86V87 743 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 TAB3Q8N5C8 712 aaPredicted RBP12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 SHKBP1Q8TBC3 707 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 JADE3Q92613 823 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 NMUR2Q9GZQ4 415 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 KIF13BQ9NQT8 1826 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 ZNF277Q9NRM2 450 aaPredicted RBP12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 EVI2BP34910 448 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 NDST2P52849 883 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 CTBSQ01459 385 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 PERM1Q5SV97 790 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 FAM205BPQ63HN1 556 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 AKAP14Q86UN6 197 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 CDKL2Q92772 493 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 SLCO2A1Q92959 643 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 GJD4Q96KN9 370 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 TCF7L2Q9NQB0 619 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 UBA2Q9UBT2 640 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 PCDHB4Q9Y5E5 795 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 TLR3O15455 904 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 NUAK1O60285 661 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 GPD2P43304 727 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 PTPN9P43378 593 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 PRKCQQ04759 706 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 CCNIQ14094 377 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 BRDTQ58F21 947 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 MDH1BQ5I0G3 518 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 TMEM270Q6UE05 265 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 DDX1Q92499 740 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 OXNAD1Q96HP4 312 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 FEM1CQ96JP0 617 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 MRIQ9BWK5 157 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 SMYD3Q9H7B4 428 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 AGO4Q9HCK5 861 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 RIC8BQ9NVN3 520 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 SCAF8Q9UPN6 1271 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 GNEQ9Y223 722 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 ADAMTSL1Q8N6G6 1762 aa12.52□□□□□ -0.41
SMARCA4-217ENST00000591595 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 C1orf232A0A0U1RR37 186 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 GOLGA8SH3BPF8 625 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 SLC22A1O15245 554 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 PRPF4O43172 522 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 ZW10O43264 779 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 RPA3P35244 121 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 CENPAP49450 140 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 PSMC5P62195 406 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 SLC1A5Q15758 541 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 PGS1Q32NB8 556 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 B3GNT9Q6UX72 402 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 KCTD20Q7Z5Y7 419 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 TMEM161BQ8NDZ6 487 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 BCL7CQ8WUZ0 217 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 ZUFSPQ96AP4 578 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 TRABDQ9H4I3 376 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 RAVER2Q9HCJ3 691 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 AVENQ9NQS1 362 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 ASTN2O75129 1339 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 SPATA31A6Q5VVP1 1343 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 ZSCAN5DPP0CG00 497 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 HAAOP46952 286 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 SLC9A3P48764 834 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 TAS2R40P59535 323 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 COPZ1P61923 177 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 CENPCQ03188 943 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 CYP24A1Q07973 514 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 GPS1Q13098 491 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 NR1H3Q13133 447 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 MTM1Q13496 603 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 TFDP1Q14186 410 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 CCNG2Q16589 344 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 DALRD3Q5D0E6 543 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 FGD3Q5JSP0 725 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 ASCC1Q8N9N2 400 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 APPL2Q8NEU8 664 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 NOL6Q9H6R4 1146 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 TBC1D22BQ9NU19 505 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 RIMKLBQ9ULI2 386 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 EP400Q96L91 3159 aa12.51□□□□□ -0.41
SMARCA4-217ENST00000591595 ATP2A1O14983 1001 aa12.5□□□□□ -0.41
SMARCA4-217ENST00000591595 DHX15O43143 795 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-217ENST00000591595 PROSCO94903 275 aa12.5□□□□□ -0.41
SMARCA4-217ENST00000591595 TBXAS1P24557 533 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-217ENST00000591595 ARSEP51690 589 aa12.5□□□□□ -0.41
SMARCA4-217ENST00000591595 FCHO2Q0JRZ9 810 aa12.5□□□□□ -0.41
SMARCA4-217ENST00000591595 SPP2Q13103 211 aa12.5□□□□□ -0.41
SMARCA4-217ENST00000591595 DLGAP5Q15398 846 aa12.5□□□□□ -0.41
SMARCA4-217ENST00000591595 ATP13A4Q4VNC1 1196 aa12.5□□□□□ -0.41
SMARCA4-217ENST00000591595 GPD1LQ8N335 351 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms