RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 COPS5Q92905 334 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 MCMBPQ9BTE3 642 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 BRD8Q9H0E9 1235 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 VCX3AQ9NNX9 186 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 AKT3Q9Y243 479 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 COMMD3-BMI1R4GMX3 469 aa12.68□□□□□ -0.38
PDE4A-207ENST00000590407 SCN1AP35498 2009 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 SMIM31A0A1B0GVY4 71 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 MAGEB16A2A368 324 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 G3V2L1 256 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 CXCL11O14625 94 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 AP2A1O95782 977 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 PGK2P07205 417 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 THRAP10827 490 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 CYP2C9P11712 490 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 VCLP18206 1134 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 PSMB4P28070 264 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 ATXN1P54253 815 aaKnown RBP12.67□□□□□ -0.38
PDE4A-207ENST00000590407 INHBEP58166 350 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 HERC3Q15034 1050 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 PCBP1Q15365 356 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDE4A-207ENST00000590407 CNPY1Q3B7I2 92 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 ANKRD20A4Q4UJ75 823 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 ZFP1Q6P2D0 407 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 FRMD7Q6ZUT3 714 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 ZNF567Q8N184 647 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 DCLK2Q8N568 766 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 CPSF7Q8N684 471 aaKnown RBP12.67□□□□□ -0.38
PDE4A-207ENST00000590407 SLC26A7Q8TE54 656 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 SLC9A7Q96T83 725 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 LGMNQ99538 433 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 MROH8Q9H579 483 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 COG4Q9H9E3 785 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 CASS4Q9NQ75 786 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 GDAP2Q9NXN4 497 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 GPRC5DQ9NZD1 345 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 SLC17A6Q9P2U8 582 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 STK39Q9UEW8 545 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 BCAP29Q9UHQ4 241 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 PSMD13Q9UNM6 376 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 MFHAS1Q9Y4C4 1052 aa12.67□□□□□ -0.38
PDE4A-207ENST00000590407 RBM47A0AV96 593 aaKnown RBP12.66□□□□□ -0.38
PDE4A-207ENST00000590407 KLHL33A6NCF5 533 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 XPO1O14980 1071 aaKnown RBP12.66□□□□□ -0.38
PDE4A-207ENST00000590407 DCLK1O15075 740 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 NCAM2O15394 837 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 MTSS1O43312 755 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 DENRO43583 198 aaKnown RBP12.66□□□□□ -0.38
PDE4A-207ENST00000590407 TIMM44O43615 452 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 TRIM13O60858 407 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 ZCCHC18P0CG32 403 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 DNAJB2P25686 324 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 GSTT1P30711 240 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 POLE2P56282 527 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 CRADDP78560 199 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 IFRD2Q12894 506 aaPredicted RBP12.66□□□□□ -0.38
PDE4A-207ENST00000590407 INTS6LQ5JSJ4 861 aaKnown RBP12.66□□□□□ -0.38
PDE4A-207ENST00000590407 FAM182AQ5T1J6 154 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 C9orf57Q5W0N0 161 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 C16orf89Q6UX73 402 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 ALKAL1Q6UXT8 129 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 PDZD4Q76G19 769 aaPredicted RBP12.66□□□□□ -0.38
PDE4A-207ENST00000590407 PHTF2Q8N3S3 785 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 MARVELD2Q8N4S9 558 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
PDE4A-207ENST00000590407 CATSPER1Q8NEC5 780 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 SHCBP1Q8NEM2 672 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 OR6B3Q8NGW1 331 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 PPTC7Q8NI37 304 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 CLEC4CQ8WTT0 213 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 PGBD4Q96DM1 585 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 DTNBP1Q96EV8 351 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 NPY6RQ99463 290 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 SERPINI1Q99574 410 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 PPP1R1BQ9UD71 204 aaPredicted RBP12.66□□□□□ -0.38
PDE4A-207ENST00000590407 ANKRD6Q9Y2G4 727 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 CSADQ9Y600 493 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 RPS6KL1Q9Y6S9 549 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 TRIP11Q15643 1979 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 ZCWPW2A0A1B0GU75 182 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 SLCO1B7G3V0H7 640 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 AP3B1O00203 1094 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 MATN2O00339 956 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 PPEF2O14830 753 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 ZBTB14O43829 449 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 HSPA4LO95757 839 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 CD4P01730 458 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 VTNP04004 478 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 CAPNS1P04632 268 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 FAM163BP0C2L3 166 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 ERVK-10P10266 1014 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 RAG1P15918 1043 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 NOS2P35228 1153 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 HCAR3P49019 387 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 NPY2RP49146 381 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 CHN2P52757 468 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 EPHB1P54762 984 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 IGBP1P78318 339 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 CUL3Q13618 768 aa12.66□□□□□ -0.38
PDE4A-207ENST00000590407 PPM1JQ5JR12 505 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms