RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 ETS1P14921 441 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 IVDP26440 423 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 VPS41P49754 854 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 IRAK1P51617 712 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 GALNT2Q10471 571 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 HLTFQ14527 1009 aaKnown RBP eCLIP17.93■□□□□ 0.46
CXXC1-212ENST00000589940 PRKD1Q15139 912 aaPredicted RBP17.93■□□□□ 0.46
CXXC1-212ENST00000589940 MAP9Q49MG5 647 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 LGI2Q8N0V4 545 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 C12orf76Q8N812 135 aaPredicted RBP17.93■□□□□ 0.46
CXXC1-212ENST00000589940 LRRN4Q8WUT4 740 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.93■□□□□ 0.46
CXXC1-212ENST00000589940 SNF8Q96H20 258 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 DDX50Q9BQ39 737 aaKnown RBP17.93■□□□□ 0.46
CXXC1-212ENST00000589940 BRD8Q9H0E9 1235 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 ZNF576Q9H609 170 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 GRHL1Q9NZI5 618 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 DOCK6Q96HP0 2047 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 CNTN5O94779 1100 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 ECHS1P30084 290 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 MYO9BQ13459 2157 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 ALFQ53S48 1182 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 HEATR6Q6AI08 1181 aaKnown RBP17.92■□□□□ 0.46
CXXC1-212ENST00000589940 RFWD3Q6PCD5 774 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 TMC5Q6UXY8 1006 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 CMTM8Q8IZV2 173 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 IGFLR1Q9H665 355 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 NDFIP2Q9NV92 336 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 WHRNQ9P202 907 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 ZMYM5Q9UJ78 669 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 LSM7Q9UK45 103 aaKnown RBP17.92■□□□□ 0.46
CXXC1-212ENST00000589940 ARHGAP26Q9UNA1 814 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 ZNF189O75820 626 aaPredicted RBP17.92■□□□□ 0.46
CXXC1-212ENST00000589940 AVPR1AP37288 418 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 CALCOCO2Q13137 446 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 RABGAP1LQ5R372 815 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 Q6ZNB5 142 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 CCNYQ8ND76 341 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 HDAC11Q96DB2 347 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 MYEOVQ96EZ4 313 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 CELF6Q96J87 481 aaKnown RBP17.92■□□□□ 0.46
CXXC1-212ENST00000589940 RETREG1Q9H6L5 497 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 NOTCH4Q99466 2003 aa17.92■□□□□ 0.46
CXXC1-212ENST00000589940 SEC31AO94979 1220 aaKnown RBP17.91■□□□□ 0.46
CXXC1-212ENST00000589940 ITIH2P19823 946 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 GARSP41250 739 aaKnown RBP17.91■□□□□ 0.46
CXXC1-212ENST00000589940 PPIDQ08752 370 aaKnown RBP17.91■□□□□ 0.46
CXXC1-212ENST00000589940 AP1B1Q10567 949 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 GPS1Q13098 491 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 AFMIDQ63HM1 303 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 TMEM184AQ6ZMB5 413 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 TFAP2DQ7Z6R9 452 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 ARHGAP12Q8IWW6 846 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 UMODL1-AS1Q8N2C9 162 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 AENQ8WTP8 325 aaKnown RBP17.91■□□□□ 0.46
CXXC1-212ENST00000589940 HTR3CQ8WXA8 447 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 FERMT1Q9BQL6 677 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 FAM129AQ9BZQ8 928 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 ARFGAP3Q9NP61 516 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 CFAP97Q9P2B7 532 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 ZNF212Q9UDV6 495 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 MRPS23Q9Y3D9 190 aaKnown RBP17.91■□□□□ 0.46
CXXC1-212ENST00000589940 VAV1P15498 845 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 RPL22P35268 128 aaKnown RBP17.91■□□□□ 0.46
CXXC1-212ENST00000589940 ACTN2P35609 894 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 NRLP54845 237 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 HYAL1Q12794 435 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 P3H1Q32P28 736 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 TCEAL5Q5H9L2 206 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 HTR3DQ70Z44 454 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 LRRC45Q96CN5 670 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 PRICKLE1Q96MT3 831 aaPredicted RBP17.91■□□□□ 0.46
CXXC1-212ENST00000589940 NEUROG2Q9H2A3 272 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 ZDHHC18Q9NUE0 388 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 ZNF510Q9Y2H8 683 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 SH3BP1Q9Y3L3 701 aa17.91■□□□□ 0.46
CXXC1-212ENST00000589940 LEFTY2O00292 366 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 GLP2RO95838 553 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 MAPKAPK2P49137 400 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 NDST2P52849 883 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 PLTPP55058 493 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 LRIT3Q3SXY7 679 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 BEND6Q5SZJ8 279 aaPredicted RBP17.9■□□□□ 0.46
CXXC1-212ENST00000589940 EMBQ6PCB8 327 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 ZDHHC24Q6UX98 284 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 CIR1Q86X95 450 aaPredicted RBP17.9■□□□□ 0.46
CXXC1-212ENST00000589940 EFHBQ8N7U6 833 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 BBOF1Q8ND07 529 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 ART4Q93070 314 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 P2RY11Q96G91 374 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 SMG9Q9H0W8 520 aaKnown RBP17.9■□□□□ 0.46
CXXC1-212ENST00000589940 ZFP37Q9Y6Q3 630 aaPredicted RBP17.9■□□□□ 0.46
CXXC1-212ENST00000589940 DOCK4Q8N1I0 1966 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 DFFAO00273 331 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 CEBPBP17676 345 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 ZNF33AQ06730 810 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 CFAP52Q8N1V2 620 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 FBXO25Q8TCJ0 367 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 SLC39A8Q9C0K1 460 aa17.9■□□□□ 0.46
CXXC1-212ENST00000589940 PAK5Q9P286 719 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms