RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 LRRC40Q9H9A6 602 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 MARCH5Q9NX47 278 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 MOCS1Q9NZB8 636 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 DNAJB4Q9UDY4 337 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 STK39Q9UEW8 545 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 MAFFQ9ULX9 164 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 FAM169AQ9Y6X4 670 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 MATN3O15232 486 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 B4GALT3O60512 393 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 EFCAB14O75071 495 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 AVILO75366 819 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 BANF1O75531 89 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 ANXA9O76027 345 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 MAP3K6O95382 1288 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 POLBP06746 335 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 OR4Q2P0C623 313 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 CCL5P13501 91 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 CPB1P15086 417 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 RHOQP17081 205 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 KRT4P19013 534 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 TUBP50607 506 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 NDST2P52849 883 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 RABGGTBP53611 331 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 NRLP54845 237 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 TBX4P57082 545 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 CORO7P57737 925 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 RING1Q06587 406 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 TRIP4Q15650 581 aaPredicted RBP10.65□□□□□ -0.7
VPS25-203ENST00000589520 FAXCQ5TGI0 409 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 HHATQ5VTY9 493 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 CNKSR3Q6P9H4 555 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 UNC5AQ6ZN44 842 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 CCDC121Q6ZUS5 278 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 CCDC117Q8IWD4 279 aaPredicted RBP10.65□□□□□ -0.7
VPS25-203ENST00000589520 TRIM42Q8IWZ5 723 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 CTAGE3PQ8IX95 158 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 GPR65Q8IYL9 337 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 LRRC34Q8IZ02 419 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 OTUD6BQ8N6M0 293 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 PDCD7Q8N8D1 485 aaKnown RBP10.65□□□□□ -0.7
VPS25-203ENST00000589520 RTL3Q8N8U3 475 aaKnown RBP10.65□□□□□ -0.7
VPS25-203ENST00000589520 ACMSDQ8TDX5 336 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 SH3TC2Q8TF17 1288 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 MZB1Q8WU39 189 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 CASP10Q92851 521 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 FBXO32Q969P5 355 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 CFAP36Q96G28 342 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 FCRL2Q96LA5 508 aaPredicted RBP10.65□□□□□ -0.7
VPS25-203ENST00000589520 GPR62Q9BZJ7 368 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 ZMYND15Q9H091 742 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 ACTR5Q9H9F9 607 aaPredicted RBP10.65□□□□□ -0.7
VPS25-203ENST00000589520 CASS4Q9NQ75 786 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 ANLNQ9NQW6 1124 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 TMPRSS4Q9NRS4 437 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 SEPT10Q9P0V9 454 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 RRP15Q9Y3B9 282 aaKnown RBP10.65□□□□□ -0.7
VPS25-203ENST00000589520 TTLL3Q9Y4R7 772 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 MAD1L1Q9Y6D9 718 aa10.65□□□□□ -0.7
VPS25-203ENST00000589520 TSC2P49815 1807 aa10.65□□□□□ -0.71
VPS25-203ENST00000589520 FRMPD3Q5JV73 1810 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 ABHD14A-ACY1A0A1B0GW23 586 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 MTMR11A4FU01 709 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 F8W810 466 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 I6L893 689 aaPredicted RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 PQBP1O60828 265 aaKnown RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 C1QAP02745 245 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 ZDHHC11BP0C7U3 371 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 ALADP13716 330 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 CREB1P16220 341 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 PSMB4P28070 264 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 PPP3CCP48454 512 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 ILF2Q12905 390 aaKnown RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 MPP2Q14168 576 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 DBN1Q16643 649 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 PDK4Q16654 411 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 STXBP5Q5T5C0 1151 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 SNX30Q5VWJ9 437 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 AFMIDQ63HM1 303 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 TPGS2Q68CL5 300 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 KCTD11Q693B1 232 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 SLC8B1Q6J4K2 584 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 RWDD4Q6NW29 188 aaKnown RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 FOXR1Q6PIV2 292 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 MARK2Q7KZI7 788 aaKnown RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 UMODL1-AS1Q8N2C9 162 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 ATPAF2Q8N5M1 289 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 PPM1NQ8N819 430 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 GBP7Q8N8V2 638 aaPredicted RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 BANPQ8N9N5 519 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 ANKLE1Q8NAG6 615 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 LRRC8CQ8TDW0 803 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 NSMCE1Q8WV22 266 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 BTN2A3PQ96KV6 586 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 FCRL5Q96RD9 977 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 TGS1Q96RS0 853 aaKnown RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 TTLL2Q9BWV7 592 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 UBE2OQ9C0C9 1292 aaKnown RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 ZYG11BQ9C0D3 744 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms